Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq486 82.4 7e-11 >seq486 Length=243247 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||||||||| |||| || ||||| || || || || || || ||| || Sbjct 19788 ATGCAAATATTTGTCAAGACTTTGACTGGAAAGACTATCACTCTGGAGGTGGAGGGTTCA 19729 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| ||| ||| || || ||||| | || || ||| Sbjct 19728 GATACCATAGACAATGTGAAGGCAAAGATTCAAGACAAGGAAGGGATCCCACCTGACCAA 19669 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||||| ||||| ||||| || || || || || ||| || ||| |||| ||||| ||| Sbjct 19668 CAAAGGCTTATTTTTGCAGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCAGATTATAAT 19609 Query 29142 ATTCAGAAGGAATCTACT 29159 || ||||||||||||||| Sbjct 19608 ATCCAGAAGGAATCTACT 19591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428283023938940