Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1186 96.9 3e-15 >seq1186 Length=588025 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || || ||||| || ||| || ||||| |||||||||||||| || || ||||| || Sbjct 8345 CAGTTCTACGTAGCCAATGGAGAGTTGTCATGTCAAATGTATCAGCGTTCTGCTGACATT 8286 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || |||||||| || || ||||||||| ||||| || || || | |||||||| ||| Sbjct 8285 GGCCTGGGTGTGCCATTTAATATTGCATCATATGCTCTTCTGACATGCATGATTGCTCAT 8226 Query 20551 GTT 20553 ||| Sbjct 8225 GTT 8223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399134629421860