Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq2255 111 1e-19 seq736 102 6e-17 seq176 91.5 1e-13 >seq2255 Length=141741 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| || |||||| ||||||||||||||| || | | || ||| Sbjct 139807 ACCAAGTGCAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTCCTTCCATCCTCC 139866 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || ||||||| ||| ||||| ||||| | ||||||||||||| Sbjct 139867 AGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGAGGGATACCCTCCTTGTCCTGG 139926 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | || | ||||| |||| ||||| ||||| Sbjct 139927 ATTTTAGCCTTCACATTGTCAATAGTATCAGAGCTTTCCACTTCCAAAGTAATTGTCTTC 139986 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||| ||||||||||||||||| Sbjct 139987 CCAGTCAAAGTTTTCACAAAGATTTGCAT 140015 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||| || || | | || || || || || ||||| || Sbjct 96462 CTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTGCTTACCGGCAAA 96403 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || ||| ||||| ||||| | |||||||||||| ||| || ||| || Sbjct 96402 GATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATT 96343 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||| || ||||||||||| || || |||||||| |||||||||||||| Sbjct 96342 ATCAATTGTATCCGAACTCTCCACCTCCAACGTTATGGTCTTGCCAGTCAGAGTCTTCAC 96283 Query 45325 AAAGATTTGCAT 45336 |||||| ||||| Sbjct 96282 AAAGATCTGCAT 96271 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| ||||||||| |||||||||||| || |||| | || || Sbjct 95567 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTCA 95508 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| || || || | || ||| ||||| || || | |||||||||||| Sbjct 95507 AGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 95448 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | ||| | || || |||| ||| || ||||| Sbjct 95447 ATCTTTGCCTTGACATTGTCAATAGTATCCGAGCTTTCAACTTCCAAGGTGATTGTCTTC 95388 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| ||||| |||||||| Sbjct 95387 CCGGTAAGGGTCTTGACAAATATTTGCAT 95359 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 || ||||| || ||| ||||||||| |||||||||||| || |||| | || || Sbjct 95795 ACTAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTCA 95736 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| || || || | |||||| ||||| || || | |||||||||||| Sbjct 95735 AGCTGCTTTCCAGCAAAGATGAGCCGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 95676 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | ||| | || || |||| ||| || ||||| Sbjct 95675 ATCTTTGCCTTGACATTGTCAATAGTATCCGAGCTTTCAACTTCCAAGGTGATTGTCTTC 95616 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| |||||||| ||||| Sbjct 95615 CCTGTAAGGGTCTTGACAAAGATCTGCAT 95587 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | || || | ||||||||||| ||| |||||| |||||||||||||| Sbjct 96269 CCACCACGCAGTCGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCA 96210 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || | |||| || || || || || || || ||||||| ||| ||||| || || Sbjct 96209 AGGGTCCTTCCGTCCTCGAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGA 96150 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||||||||||| ||||| ||| || | | | || | ||||| Sbjct 96149 ATACCCTCCTTGTCCTGGATTTTGGCCTTCACATTATCAATAGTATCAGAGCTTTCCACT 96090 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||||| || || || |||||||| |||||||| || ||||| Sbjct 96089 TCCAGAGTAATGGTTTTCCCAGTCAGAGTTTTCACAAATATCTGCAT 96043 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| |||||||||||||||||| || || | |||| ||||| || Sbjct 139584 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCGTCCTCCAGCTG 139643 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || || | || || ||||| ||||| | |||||||||||| ||| || Sbjct 139644 CTTACCCGCAAAGATGAGCCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTT 139703 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 || || | | | | || || ||||||||||| || |||||||| || || Sbjct 139704 AGCTTTCACATTATCAATGGTATCAGAACTCTCCACCTCCAGAGTTATCGTCTTCCCAGT 139763 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || |||||||||||||| ||||| Sbjct 139764 GAGGGTCTTCACAAAGATCTGCAT 139787 >seq736 Length=481145 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| ||||||||| ||||||||||| || || | || ||| Sbjct 406268 ACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTCC 406327 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || ||||||| || ||||| || || | ||||||||||||| Sbjct 406328 AGCTGCTTCCCTGCAAAGATCAACCTTTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGG 406387 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| | ||| ||||||| || || ||||| Sbjct 406388 ATCTTCGCCTTGACATTGTCAATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTT 406447 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||||||||| || ||||| Sbjct 406448 CCTGTCAGGGTCTTCACAAAAATCTGCAT 406476 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||||||||| ||||| ||| | | || |||| || || ||||| || Sbjct 405829 CTCCTTCTGAATGTTATAGTCAGCCAGAGTCCTTCCATCCTCCAACTGCTTACCGGCAAA 405888 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||||| ||| ||||| ||||| | ||| ||||||||| || || ||| || Sbjct 405889 GATCAACCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 405948 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | ||||| | ||||||||||| || || ||||| || |||| |||||||| Sbjct 405949 GTCGATTGTGTCCGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTCAC 406008 Query 45325 AAAGATTTGCAT 45336 |||||| ||||| Sbjct 406009 AAAGATCTGCAT 406020 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||| |||||||| || || |||| ||||| || || || || || Sbjct 406057 CTCCTTCTGAATATTGTAGTCAGCCAAAGTACGGCCGTCCTCCAGCTGCTTCCCTGCAAA 406116 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||||| ||| ||||| || || | |||||||||||| || || ||| || Sbjct 406117 GATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 406176 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||||| | ||| ||||||| || || ||||| || ||||| |||||||| Sbjct 406177 GTCGATGGTGTCCGAGCTCTCGACCTCCAAAGTGATAGTCTTTCCGGTCAGGGTCTTCAC 406236 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 406237 GAAGATCTGCAT 406248 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 || ||||| || || ||||||||| ||||||||||| || || | || ||| Sbjct 406724 ACTAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTACGGCCATCCTCC 406783 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| || ||| ||||| || || | ||| |||||||| | Sbjct 406784 AGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGA 406843 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | |||| | || ||||| | ||| || ||||| Sbjct 406844 ATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTCTTA 406903 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||| ||||| Sbjct 406904 CCGGTGAGGGTCTTGACGAAGATCTGCAT 406932 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 || || || || ||| ||||||||| ||||||||||| || || | || || Sbjct 406496 ACTAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCG 406555 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || |||||||| || |||| || ||| ||||| || || | |||||||| || | Sbjct 406556 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTATCTTGA 406615 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | || ||||||| ||| || |||||| Sbjct 406616 ATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGATGGTCTTG 406675 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || ||||| || ||||| |||||| Sbjct 406676 CCGGTGAGGGTCTTGACGAAGATCTGCATG 406705 >seq176 Length=136227 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||||| | || ||||||| || ||||| || |||||||||||| Sbjct 89075 CCACCTCTCAATCGAAGAACTAAGTGCAAAGTTGATTCCTTTTGGATGTTGTAGTCGGCG 89134 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || |||| |||| ||| ||||| ||||| ||||||| ||| ||||| || || Sbjct 89135 AGGGTTCGGCCGTCCTCCAATTGCTTTCCTGCGAAAATCAACCTCTGCTGGTCTGGGGGG 89194 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||| || || || ||| || | | | | || | ||| || Sbjct 89195 ATGCCCTCCTTATCTTGGATCTTGGCCTTCACGTTGTCGATGGTATCAGAGCTCTCGACT 89254 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCTC 45344 || | ||| || ||||| || || || || || || ||||||||||| ||||| Sbjct 89255 TCTAGGGTTATTGTCTTCCCGGTTAGGGTTTTGACGAAGATTTGCATACCGCCTC 89309 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || |||||||||| | |||||||||| || ||||| || || ||||||||| Sbjct 89303 CCGCCTCTCAATCGGAGAACCAAGTGCAAAGTCGATTCCTTTTGGATATTGTAGTCGGCA 89362 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| |||| |||| ||| || |||||||| ||||||| ||| ||||| || || Sbjct 89363 AGGGTGCGGCCGTCCTCCAATTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGG 89422 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||||||||| ||||| ||| || | | | || | ||| || Sbjct 89423 ATGCCCTCCTTGTCTTGGATTTTGGCCTTTACGTTGTCGATCGTATCAGAGCTCTCGACT 89482 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | ||| || ||||| || || || || || || ||||| ||||| Sbjct 89483 TCTAAGGTTATGGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 89529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395026337593108