Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq7758 145 1e-29 seq853 145 1e-29 >seq7758 Length=1097 Score = 145 bits (160), Expect = 1e-29 Identities = 388/587 (66%), Gaps = 6/587 (1%) Strand=Plus/Plus Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209 ||| ||| || ||||| |||||||| | |||||| |||| || || ||||| || | Sbjct 404 ACAGCAAGCACGCGAAGTCGCAGTGCAAACCCTCATCTCGCGAGATCAACTCGTTTGAGA 463 Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCA 36268 |||| ||||| ||||||| || ||||| || ||||||||||| | |||||| | || Sbjct 464 ACGTCAGTCCAGGCATTAACCCGCGCTTCTTTAGCCAAAATATCG-CGCAAAAACTCCCC 522 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT- 36327 || ||||| || ||||| || |||||||| | | || | |||| || || || Sbjct 523 GAGAAGAATATCCCTTCCACGCAAGCAAAGGCCACGA-TC-CGCTCCGCAAACGATTCTG 580 Query 36328 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 36386 | | | ||||| | | ||||| | ||||||||| | || || || || || || | Sbjct 581 AGCCGTCGATCCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGA 640 Query 36387 TAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGAC 36446 | |||| ||| || ||| || || | || || | || || || | | || | Sbjct 641 TCGCATGAAAAAGCCTGTTCTTCTCGTCTGAGTCCTTGATGTAGGTCTCCAGGAGGAGGC 700 Query 36447 TATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCT 36506 | ||||| || || || ||||| || ||||| || || || |||||||| || ||||| Sbjct 701 TGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCTCGAGCCT 760 Query 36507 CGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 36566 ||| | ||| ||||| | || | | | || | ||| || || || |||||| Sbjct 761 CGGAGACCTGGACTTCCTTCATGAACCTTCCGGCGAGATTCTCCAAAACAATGCCGTCAG 820 Query 36567 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTAT 36626 ||| || || || || | || || | || || | || ||| || | ||| | Sbjct 821 AGGCAGCGAAGAAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCGGGGGCTAGAAGTT 880 Query 36627 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 36686 ||| | | || | ||| ||| || || || | ||||| || || ||||| | Sbjct 881 CCCAGTGGCGTAGGTCCTGGCATAAATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGG 940 Query 36687 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 36733 |||| || ||||| | |||||| || | ||||| || || || ||| Sbjct 941 CCTTCTTGTACATCTCCCAGATTTCCGGGTATTGGATCGGGAACATA 987 >seq853 Length=703183 Score = 145 bits (160), Expect = 1e-29 Identities = 388/587 (66%), Gaps = 6/587 (1%) Strand=Plus/Plus Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209 ||| ||| || ||||| |||||||| | |||||| |||| || || ||||| || | Sbjct 573540 ACAGCAAGCACGCGAAGTCGCAGTGCAAACCCTCATCTCGCGAGATCAACTCGTTTGAGA 573599 Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCA 36268 |||| ||||| ||||||| || ||||| || ||||||||||| | |||||| | || Sbjct 573600 ACGTCAGTCCAGGCATTAACCCGCGCTTCTTTAGCCAAAATATCG-CGCAAAAACTCCCC 573658 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT- 36327 || ||||| || ||||| || |||||||| | | || | |||| || || || Sbjct 573659 GAGAAGAATATCCCTTCCACGCAAGCAAAGGCCACGA-TC-CGCTCCGCAAACGATTCTG 573716 Query 36328 -GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 36386 | | | ||||| | | ||||| | ||||||||| | || || || || || || | Sbjct 573717 AGCCGTCGATCCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGA 573776 Query 36387 TAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGAC 36446 | |||| ||| || ||| || || | || || | || || || | | || | Sbjct 573777 TCGCATGAAAAAGCCTGTTCTTCTCGTCTGAGTCCTTGATGTAGGTCTCCAGGAGGAGGC 573836 Query 36447 TATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCT 36506 | ||||| || || || ||||| || ||||| || || || |||||||| || ||||| Sbjct 573837 TGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCTCGAGCCT 573896 Query 36507 CGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 36566 ||| | ||| ||||| | || | | | || | ||| || || || |||||| Sbjct 573897 CGGAGACCTGGACTTCCTTCATGAACCTTCCGGCGAGATTCTCCAAAACAATGCCGTCAG 573956 Query 36567 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTAT 36626 ||| || || || || | || || | || || | || ||| || | ||| | Sbjct 573957 AGGCAGCGAAGAAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCGGGGGCTAGAAGTT 574016 Query 36627 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 36686 ||| | | || | ||| ||| || || || | ||||| || || ||||| | Sbjct 574017 CCCAGTGGCGTAGGTCCTGGCATAAATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGG 574076 Query 36687 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 36733 |||| || ||||| | |||||| || | ||||| || || || ||| Sbjct 574077 CCTTCTTGTACATCTCCCAGATTTCCGGGTATTGGATCGGGAACATA 574123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658089310780320