Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq736 93.3 3e-14 >seq736 Length=481145 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | ||||||||||| |||| |||||| || | ||||| || | Sbjct 406250 CCACCACGGAGACGAAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCG 406309 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || |||| || || || ||||| ||||| | || || || | || Sbjct 406310 AGGGTACGGCCATCCTCCAGCTGCTTCCCTGCAAAGATCAACCTTTGCTGGTCCGGTGGG 406369 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061 | ||| || || || |||| | | ||||| || ||| ||||| | ||| |||||| Sbjct 406370 ATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATGGTGTC-CGAGCTCTCGAC 406428 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || ||||| || || || ||||||||||| ||||| Sbjct 406429 CTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACAAAAATCTGCAT 406476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381322432684584