Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq7758 132 7e-26 seq853 132 7e-26 >seq7758 Length=1097 Score = 132 bits (146), Expect = 7e-26 Identities = 572/874 (65%), Gaps = 53/874 (6%) Strand=Plus/Minus Query 125016 GACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGAT 125075 || || ||||| |||||||| ||||| |||||||||| ||||| | ||| ||||| ||| Sbjct 965 GAAATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGTTGAT 906 Query 125076 CTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG----TT 125131 | | | ||||||| | | ||||| || | | | | | |||||| || Sbjct 905 TTATGCCAGGACCTACGCCACTGGGAACTTC--TAGCCC----CCG-GCGAGAAGCACTT 853 Query 125132 TATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTT 125191 || | ||| | | |||||||| || | ||| || || || || || ||||| Sbjct 852 CATCACCCACGTGCTCGCCTTCTTCGCTGCCTCTGACGGCATTGTTTTGGAGAATCTCGC 793 Query 125192 GACACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGTGCTTT-TACGGATTCCA 125248 | | ||| | ||| | | ||| || | |||| ||| || || ||||| ||||| Sbjct 792 CGGAAGGTTCA-TGAAG-GAAGTCCAGGTCTCCGAGGC-TCGAGCCTTCTACGGCTTCCA 736 Query 125249 AATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCG 125308 ||| || |||||| | ||||| || |||||| || | || | ||||| Sbjct 735 GATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTCCTGGAGACCTACATCAA 676 Query 125309 CGATCCGCA-ACGTAAACA-CATGCTCTTTAACGCAATCGACACGGTGCCGTCTAT-ACG 125365 || | || ||| || | || ||| ||| | || ||||| || | || | | ||| Sbjct 675 GGA--CTCAGACGAGAAGAACAGGCTTTTTCATGCGATCGATACCATTCCCTGCGTCACG 618 Query 125366 TAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACG-ACAAGTCTTCGTACGCCGACA 125424 || ||||| || |||| | || |||||||| | | | || |||| || || Sbjct 617 -AAGAAGGCCCAGTGGGCCCTACGCTGGATCGACGGCTCAGAA----TCGTTTGCGGAGC 563 Query 125425 GACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCT 125484 | | ||||| || || ||| || || || ||||| ||||| |||||| || || | Sbjct 562 GGATCGTGGCCTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGGAGTTTTTGCGCGATAT 503 Query 125485 TTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTC 125544 ||||||| ||||||||||| | ||||| ||||||||| | |||||||| || || | Sbjct 502 TTTGGCTAAAGAAGCGCGGGTTAATGCCTGGACTGACGTTCTCAAACGAGTTGATCTCGC 443 Query 125545 GAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCG 125604 |||| ||||| | ||||| ||||| || | |||| ||| ||| | | Sbjct 442 GAGATGAGGGTTTGCACTGCGACTTCGCGTGCTTGCTGT------ACTCGCTG----CTG 393 Query 125605 AGTGCAGATCC--AGCGATGAAAAGGTCA--TC-AACATTGTAACCGATGCCGTGAGGAT 125659 || | ||| | ||||| || ||| | || | ||| || | || ||| ||| Sbjct 392 AG-GAAGAAGCTGAGCGAGGATCGGGTGAAGTCGATCATACGAA---ACGCGGTGGAGAT 337 Query 125660 AGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCT 125719 ||| |||||| | |||| | ||||| | | || | || |||||| || | || Sbjct 336 AGAGAGAGAGTTCGTGTGCGAAGCGTTACCGTGCGCCCTGGTGGGGATGAACGGCGATCT 277 Query 125720 AATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG-TTGATTGGCCGCA 125778 |||| || ||||||| ||||| ||||| ||| | || ||| ||| ||| | | | | Sbjct 276 AATGAGCCAGTACATCGAGTTCGTGGCGGATAGGCTGCTGGCTGAGCTTGGGT-ACGGGA 218 Query 125779 AGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA-CTAG-AGGGTAA 125836 |||| ||||| | |||| || || || | ||| ||| |||| || | |||| || Sbjct 217 AGATGTACAATGTGCAGAACCCGTTCGAATGGATG--GAGCTGATCAGCTTGCAGGGGAA 160 Query 125837 GACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 |||||| || |||||||||| ||| | |||||| Sbjct 159 GACCAATTTCTTCGAGAAGAGGGTTGGGGAGTAC 126 >seq853 Length=703183 Score = 132 bits (146), Expect = 7e-26 Identities = 572/874 (65%), Gaps = 53/874 (6%) Strand=Plus/Minus Query 125016 GACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGAT 125075 || || ||||| |||||||| ||||| |||||||||| ||||| | ||| ||||| ||| Sbjct 574101 GAAATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGTTGAT 574042 Query 125076 CTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG----TT 125131 | | | ||||||| | | ||||| || | | | | | |||||| || Sbjct 574041 TTATGCCAGGACCTACGCCACTGGGAACTTC--TAGCCC----CCG-GCGAGAAGCACTT 573989 Query 125132 TATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTT 125191 || | ||| | | |||||||| || | ||| || || || || || ||||| Sbjct 573988 CATCACCCACGTGCTCGCCTTCTTCGCTGCCTCTGACGGCATTGTTTTGGAGAATCTCGC 573929 Query 125192 GACACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGTGCTTT-TACGGATTCCA 125248 | | ||| | ||| | | ||| || | |||| ||| || || ||||| ||||| Sbjct 573928 CGGAAGGTTCA-TGAAG-GAAGTCCAGGTCTCCGAGGC-TCGAGCCTTCTACGGCTTCCA 573872 Query 125249 AATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCG 125308 ||| || |||||| | ||||| || |||||| || | || | ||||| Sbjct 573871 GATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTCCTGGAGACCTACATCAA 573812 Query 125309 CGATCCGCA-ACGTAAACA-CATGCTCTTTAACGCAATCGACACGGTGCCGTCTAT-ACG 125365 || | || ||| || | || ||| ||| | || ||||| || | || | | ||| Sbjct 573811 GGA--CTCAGACGAGAAGAACAGGCTTTTTCATGCGATCGATACCATTCCCTGCGTCACG 573754 Query 125366 TAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACG-ACAAGTCTTCGTACGCCGACA 125424 || ||||| || |||| | || |||||||| | | | || |||| || || Sbjct 573753 -AAGAAGGCCCAGTGGGCCCTACGCTGGATCGACGGCTCAGAA----TCGTTTGCGGAGC 573699 Query 125425 GACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCT 125484 | | ||||| || || ||| || || || ||||| ||||| |||||| || || | Sbjct 573698 GGATCGTGGCCTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGGAGTTTTTGCGCGATAT 573639 Query 125485 TTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTC 125544 ||||||| ||||||||||| | ||||| ||||||||| | |||||||| || || | Sbjct 573638 TTTGGCTAAAGAAGCGCGGGTTAATGCCTGGACTGACGTTCTCAAACGAGTTGATCTCGC 573579 Query 125545 GAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCG 125604 |||| ||||| | ||||| ||||| || | |||| ||| ||| | | Sbjct 573578 GAGATGAGGGTTTGCACTGCGACTTCGCGTGCTTGCTGT------ACTCGCTG----CTG 573529 Query 125605 AGTGCAGATCC--AGCGATGAAAAGGTCA--TC-AACATTGTAACCGATGCCGTGAGGAT 125659 || | ||| | ||||| || ||| | || | ||| || | || ||| ||| Sbjct 573528 AG-GAAGAAGCTGAGCGAGGATCGGGTGAAGTCGATCATACGAA---ACGCGGTGGAGAT 573473 Query 125660 AGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCT 125719 ||| |||||| | |||| | ||||| | | || | || |||||| || | || Sbjct 573472 AGAGAGAGAGTTCGTGTGCGAAGCGTTACCGTGCGCCCTGGTGGGGATGAACGGCGATCT 573413 Query 125720 AATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG-TTGATTGGCCGCA 125778 |||| || ||||||| ||||| ||||| ||| | || ||| ||| ||| | | | | Sbjct 573412 AATGAGCCAGTACATCGAGTTCGTGGCGGATAGGCTGCTGGCTGAGCTTGGGT-ACGGGA 573354 Query 125779 AGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA-CTAG-AGGGTAA 125836 |||| ||||| | |||| || || || | ||| ||| |||| || | |||| || Sbjct 573353 AGATGTACAATGTGCAGAACCCGTTCGAGTGGATG--GAGCTGATCAGCTTGCAGGGGAA 573296 Query 125837 GACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 |||||| || |||||||||| ||| | |||||| Sbjct 573295 GACCAATTTCTTCGAGAAGAGGGTTGGGGAGTAC 573262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740965196640480