Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq176 82.4 5e-11 >seq176 Length=136227 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||||| ||| | ||||||||||| || || |||||||| | || | | | || || Sbjct 88636 CACCAGATGAAGAGTCGACTCTTTCTGGATGTTGTAATCCGCCAGAGTCCTTCCATCCTC 88695 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279 ||||||||| ||| ||| || | | ||||| || | || || ||||| || || Sbjct 88696 CAATTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCCTG 88755 Query 33280 AATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTT 33339 |||| | || || | | |||||| || | | || |||| ||||||||| || Sbjct 88756 AATCTTCGCCTTCACATTGTCAATCGTATCAGAGCTCTCGACCTCCAAAGTTATCGTCTT 88815 Query 33340 TCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || |||||||| ||||| Sbjct 88816 CCCTGTAAGGGTCTTCACGAAAATCTGCAT 88845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318738173984904