Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1231 87.8 2e-12 seq113 84.2 2e-11 >seq1231 Length=361431 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||| |||||| |||| ||| || || ||| | |||| ||| || || ||||| ||| Sbjct 154489 GATAAGGAAGGCATCCCTCCTGACCAACAGAGATTGATTTTTGCTGGTAAGCAATTGGAA 154430 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| ||| | || ||||||||||||||||| ||||| || | || |||| ||| Sbjct 154429 GATGGTCGAACTCTTGCAGATTATAACATTCAAAAGGAGTCAACACTTCACTTGGTTTTG 154370 Query 115499 AGATTGCGAGGAGGAA 115514 || || | ||||||| Sbjct 154369 AGGCTGAGGGGAGGAA 154354 >seq113 Length=202937 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||| |||||| |||| ||| ||||| ||| | |||| ||| || || ||||| || Sbjct 28920 GATAAGGAAGGCATCCCTCCTGACCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAG 28861 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | ||| | || ||||||||||| || || ||||| || | || |||| ||| Sbjct 28860 GATGGCCGAACTCTTGCAGATTATAACATCCAGAAGGAGTCAACGCTTCACCTGGTTTTG 28801 Query 115499 AGATTGCGAGGAGGAA 115514 || || | ||||||| Sbjct 28800 AGGCTGAGGGGAGGAA 28785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425291393985760