Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq96 327 1e-84 >seq96 Length=556063 Score = 327 bits (362), Expect = 1e-84 Identities = 538/769 (70%), Gaps = 10/769 (1%) Strand=Plus/Plus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | ||||||||||| | | ||||| ||||| ||||| || |||||||| Sbjct 6932 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGC 6991 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || |||| ||||| ||| ||| | || | || || ||| || || || || ||| Sbjct 6992 CTATTTCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTCCACAGGTACAACCTTT 7051 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACC--TTG--AGGGTGCTAATTT 167475 || || ||||||||||| | || || |||| | ||| ||| || ||| || Sbjct 7052 GTAACTTCATGGTATACCCATGAATTAGCA---AGTTCCTATTTGGAAGGCTG-TAACTT 7107 Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTG 167535 | | || | ||||| || ||||| ||| | | | | || ||| | | |||| || Sbjct 7108 TTTAACCGTCGCAGTTTCCACTCCGGCTAATAGTTTAGCACACTCTTTATTGTTACTATG 7167 Query 167536 GGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTT 167595 ||||||| | | || || || || | | ||||| || | || || || ||| |||| Sbjct 7168 GGGTCCTAAAGCACAAGGAGACTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTT 7227 Query 167596 TGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAG 167655 ||| || || || || || || | || ||||| |||||| | || |||||||| | Sbjct 7228 TGTTGCTCTACATGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGC 7287 Query 167656 TAGA-CTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCT 167714 | || ||| | | | || ||||| ||||| || || || ||| ||| |||| ||| | Sbjct 7288 TCGATCTATTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTAGTCGAATTGTTGTTT 7346 Query 167715 TTGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGT 167774 |||| | ||| || || || ||||| || || |||| ||||||| ||||| || | Sbjct 7347 TTGTTTATGTATTCCTAATTTATCCGCTAGGTCAGTTTGGTTGGTTTTTTGCGCCCAGTT 7406 Query 167775 TTGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGC 167834 ||||||| ||||| |||||| ||||| | || || | || || || ||||| ||||| Sbjct 7407 TTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACAT 7466 Query 167835 TCAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAA 167894 | ||||| || |||||||||||||||||||| | | |||| ||| || | | ||| | Sbjct 7467 TGAACCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGTGCTA 7526 Query 167895 TCCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCA 167954 | ||||||| ||| |||| |||||| | | |||||||||||| ||||| || ||| Sbjct 7527 TTCATGGTGCTACTATAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCC 7586 Query 167955 AAGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCT 168014 || ||| | | ||||| | || ||||||||||| |||||||| |||| || || | Sbjct 7587 GTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCACTAATCGCTTTT 7646 Query 168015 GGTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTT 168063 |||| ||||| ||| | ||||||| |||||| ||||||| || || Sbjct 7647 GGTCCCAAATCTTTAGGGTTGCTTTTTCCAATAAATGTTGGTTACATTT 7695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567160046620800