Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq486 82.4 5e-11 >seq486 Length=243247 Score = 82.4 bits (90), Expect = 5e-11 Identities = 143/207 (69%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | || || || || || || || || || |||| ||| | || Sbjct 19788 ATGCAAATATTTGTCAAGACTTTGACTGGAAAGACTATCACTCTGGAGGTGGAGGGTTCA 19729 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || | ||| ||| ||| || || || || | ||||| || Sbjct 19728 GATACCATAGACAATGTGAAGGCAAAGATTCAAGACAAGGAAGGGATCCCACCTG---AC 19672 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| || ||||| ||||| || || || || || ||| | ||| |||| ||||| Sbjct 19671 CAACAAAGGCTTATTTTTGCAGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCAGATTAT 19612 Query 22011 AATATTCAGAAGGAATCTACTCTTCAT 22037 ||||| ||||||||||||||| | ||| Sbjct 19611 AATATCCAGAAGGAATCTACTTTGCAT 19585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358080507572392