Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq59 105 1e-17 >seq59 Length=608880 Score = 105 bits (116), Expect = 1e-17 Identities = 194/282 (69%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 149213 GTAAGCATCACACATCTCGATTCCGGCGATTTTCGCTATCGCGTATGGTTTGTTAGTGGG 149272 |||||| | ||||||| ||| |||||||| || || ||||| || | || ||||| Sbjct 602379 GTAAGCCTGGCACATCTTGATCCCGGCGATCTTGGCAATCGCATACCACTCATTTGTGGG 602438 Query 149273 TTCGAGAAATCCTGTCATCAGATATTCTTCCTTG-ATAGGATTTTGAGCTTCTTTTGGGT 149331 || ||| || || | || || ||| | | ||||| | | |||| || |||| Sbjct 602439 CTCCAGAGGGCCCGTTAACA-ATGCGCTTTCGGGGATAGGCTGTGGAGCGAACTTGGGGT 602497 Query 149332 AAATGCAACTGCTACCGAGAAACACGAGTTTTTTCACTCCGAACATTTTGGACGCATGAA 149391 |||| ||| | |||||||||| ||| || ||||||||||| | || || | | Sbjct 602498 AAATACAAGAGGAGCCGAGAAACAAGAGCTTCTTCACTCCGAATCGGTACGAGGCGTCGA 602557 Query 149392 TGACATTCGTCTGAATCATCAGATTATCGTGAATAAAATCGCCCCCGAAGGAGTTGTTCG 149451 | ||||| ||||| ||| ||||| || || ||||| || | | | |||||| | Sbjct 602558 TCACATTGGTCTGGATCTGGAGATTGACGGCGATGAAATCTGCCGGGTATGTGTTGTTGG 602617 Query 149452 CGTGAATACCTCCTACTTTTGCAGCCGCGAGAAATACGTATT 149493 ||||||| || || |||||||| || ||||| | ||| ||| Sbjct 602618 CGTGAATGCCGCCAACTTTTGCCGCGGCGAGGATGACGAATT 602659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102736602163800