Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq309 84.2 3e-11 >seq309 Length=181836 Score = 84.2 bits (92), Expect = 3e-11 Identities = 190/280 (68%), Gaps = 8/280 (3%) Strand=Plus/Minus Query 12792 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGC 12851 |||||||||||||| ||||| || ||||| ||||| || || | ||||||||| | | Sbjct 48234 AAGCCATCCATCTCCGTCAACAGCTGATTAATGGTCTGCTCCCTCTCATCATTCCCACCC 48175 Query 12852 ATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACAC 12911 ||| || | | ||| | || || || ||||| || |||||||| || || ||| Sbjct 48174 CCCATACCTGCTCCTCTCTGCCTCCCCACCGCATCAATCTCATCAATGAACACAATGCAC 48115 Query 12912 GGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCAC 12970 || | ||| || ||| || || | || ||||||||| ||||| || ||||| Sbjct 48114 GG-CGCTTTCGACTTGGCCTTCTCGAACAAGTCCCGCACTCTCGACGCACCCACTCCCAC 48056 Query 12971 AAACATCTCCACAAAAT-TG--GCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACC 13027 ||||| ||||| || | || || ||| || | || || || || | || || Sbjct 48055 AAACAATTCCACGAACTCTGAAGCTGCGCAAGA---GAAAAACGGCACCCCAGCCTCGCC 47999 Query 13028 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGT 13067 || | ||| || || || |||||||| || || || ||| Sbjct 47998 GGCCACGGCCCGAGCCAGAAGGGTCTTGCCGGTACCAGGT 47959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613429376611680