Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq853 187 4e-42 seq7758 181 2e-40 >seq853 Length=703183 Score = 187 bits (206), Expect = 4e-42 Identities = 552/839 (66%), Gaps = 23/839 (3%) Strand=Plus/Plus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||||||||| || |||||||| |||| || | || ||||| || |||| |||| Sbjct 573276 TCTTCTCGAAGAAATTGGTCTTCCCCTGCAAGCTGATCAGCTCCATCCACTCGAACGGGT 573335 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 ||| ||| | || |||| | || || | ||||||| ||| || ||||| || | Sbjct 573336 TCTGCACATTGTACATCTTCCCGTACCCAAGCTCAGCCAGCAGCCTATCCGCCACGAACT 573395 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC-CTAACGGGGAGCGCTTCC 159826 ||||||| | ||| | || | ||| ||||||| ||| | |||| | |||||| Sbjct 573396 CGATGTACTGGCTCATTAGATCGCCGTTCATCCCCACCAGGGCGCACGGTAA-CGCTTCG 573454 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGC-TTCGGTCACAATCTGCGAGACACGTTCGTA 159885 ||| ||||| |||| ||||| ||||| || || | ||| | || || || | Sbjct 573455 CACACGAACTCTCTCTCTATCTCCACCGCGTTTCGT-ATGATCGACTTCACCCGATCCTC 573513 Query 159886 CCCCGGCTTG---CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAG 159942 | | |||| | || | || |||| | |||||| ||||||||||||| Sbjct 573514 GCTCAGCTTCTTCCTCAGCAGCGAGT------ACAGCAAGCACGCGAAGTCGCAGTGCAA 573567 Query 159943 TCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGG 160002 ||||| || || ||||| |||||||| || | | || || ||||| | ||| ||| Sbjct 573568 ACCCTCATCTCGCGAGATCAACTCGTTTGAGAACGTCAGTCCAGGCATTAACCCGCGCTT 573627 Query 160003 TTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCAA 160061 || |||||||| || | ||||||| | || | | || || ||||| |||||| |||| Sbjct 573628 CTTTAGCCAAAATATCG-CGCAAAAACTCCCCGAGAAGAATATCCCTTCCACGCAAGCAA 573686 Query 160062 ACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATT 160121 | ||||||| || ||| |||| || | | | | | | |||| | | |||||| | Sbjct 573687 AGGCCACGATCCGCTCCGCAAACGA---TTCTGAGCCGTCGATCCAGCGTAGGGCCCACT 573743 Query 160122 CAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCT 160181 |||||||| | || ||| || ||| |||| || | ||| | |||| || ||| | Sbjct 573744 GGGCCTTCTTCGTGACGCAGGGAATGGTATCGATCGCATGAAAAAGCCTGTTCTTCTCGT 573803 Query 160182 TCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGA 160241 |||||||| || | | || |||||| || | ||| | || |||| Sbjct 573804 CTGAGTCCTTGATGTAGGTCTCCAGGAGGAGGCTGTACATCTCGGAGTGGATGTTCTCGA 573863 Query 160242 TGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC-CAGATACTGCACCTCCTGTGTGAAC 160300 |||| ||||| ||| |||||| | ||||| ||| ||| || |||| ||||| Sbjct 573864 TGGCGATCTGGAAGCCGTAGAAGGCTCGAGCCTCGGAGA-CCTGGACTTCCTTCATGAAC 573922 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 ||| | ||||| | ||| | ||||| | ||| || ||||| || | |||||| Sbjct 573923 CTTCCGGCGAGATTCTCCAAAACAATGCCGTCAGAGGCAGCGAAGAAGGCGAGCACGTGG 573982 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 | |||||| || ||||| | | | | ||||||||| | ||| ||| Sbjct 573983 GTGATGAAGTGCTTCTCGCC---GGGGGCTAGAAGTTCCCAGTGGCGTAGGTCCTGGCAT 574039 Query 160421 AAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 ||||||||||| || ||| |||| || |||| || | |||||||| ||||||| Sbjct 574040 AAATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGAT 574098 >seq7758 Length=1097 Score = 181 bits (200), Expect = 2e-40 Identities = 551/839 (66%), Gaps = 23/839 (3%) Strand=Plus/Plus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||||||||| || |||||||| |||| || | || ||||| | |||| |||| Sbjct 140 TCTTCTCGAAGAAATTGGTCTTCCCCTGCAAGCTGATCAGCTCCATCCATTCGAACGGGT 199 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 ||| ||| | || |||| | || || | ||||||| ||| || ||||| || | Sbjct 200 TCTGCACATTGTACATCTTCCCGTACCCAAGCTCAGCCAGCAGCCTATCCGCCACGAACT 259 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC-CTAACGGGGAGCGCTTCC 159826 ||||||| | ||| | || | ||| ||||||| ||| | |||| | |||||| Sbjct 260 CGATGTACTGGCTCATTAGATCGCCGTTCATCCCCACCAGGGCGCACGGTAA-CGCTTCG 318 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGC-TTCGGTCACAATCTGCGAGACACGTTCGTA 159885 ||| ||||| |||| ||||| ||||| || || | ||| | || || || | Sbjct 319 CACACGAACTCTCTCTCTATCTCCACCGCGTTTCGT-ATGATCGACTTCACCCGATCCTC 377 Query 159886 CCCCGGCTTG---CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAG 159942 | | |||| | || | || |||| | |||||| ||||||||||||| Sbjct 378 GCTCAGCTTCTTCCTCAGCAGCGAGT------ACAGCAAGCACGCGAAGTCGCAGTGCAA 431 Query 159943 TCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGG 160002 ||||| || || ||||| |||||||| || | | || || ||||| | ||| ||| Sbjct 432 ACCCTCATCTCGCGAGATCAACTCGTTTGAGAACGTCAGTCCAGGCATTAACCCGCGCTT 491 Query 160003 TTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCAA 160061 || |||||||| || | ||||||| | || | | || || ||||| |||||| |||| Sbjct 492 CTTTAGCCAAAATATCG-CGCAAAAACTCCCCGAGAAGAATATCCCTTCCACGCAAGCAA 550 Query 160062 ACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATT 160121 | ||||||| || ||| |||| || | | | | | | |||| | | |||||| | Sbjct 551 AGGCCACGATCCGCTCCGCAAACGA---TTCTGAGCCGTCGATCCAGCGTAGGGCCCACT 607 Query 160122 CAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCT 160181 |||||||| | || ||| || ||| |||| || | ||| | |||| || ||| | Sbjct 608 GGGCCTTCTTCGTGACGCAGGGAATGGTATCGATCGCATGAAAAAGCCTGTTCTTCTCGT 667 Query 160182 TCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGA 160241 |||||||| || | | || |||||| || | ||| | || |||| Sbjct 668 CTGAGTCCTTGATGTAGGTCTCCAGGAGGAGGCTGTACATCTCGGAGTGGATGTTCTCGA 727 Query 160242 TGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC-CAGATACTGCACCTCCTGTGTGAAC 160300 |||| ||||| ||| |||||| | ||||| ||| ||| || |||| ||||| Sbjct 728 TGGCGATCTGGAAGCCGTAGAAGGCTCGAGCCTCGGAGA-CCTGGACTTCCTTCATGAAC 786 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 ||| | ||||| | ||| | ||||| | ||| || ||||| || | |||||| Sbjct 787 CTTCCGGCGAGATTCTCCAAAACAATGCCGTCAGAGGCAGCGAAGAAGGCGAGCACGTGG 846 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 | |||||| || ||||| | | | | ||||||||| | ||| ||| Sbjct 847 GTGATGAAGTGCTTCTCGCC---GGGGGCTAGAAGTTCCCAGTGGCGTAGGTCCTGGCAT 903 Query 160421 AAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 ||||||||||| || ||| |||| || |||| || | |||||||| ||||||| Sbjct 904 AAATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTCCCAGAT 962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795054334562880