Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq7758 86.0 7e-12 seq853 86.0 7e-12 >seq7758 Length=1097 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| || ||||| | ||| || ||| ||||||||||| | || | ||| Sbjct 433 CCCTCATCTCGCGAGATCAACTCGTTTGAGAACGTCAGTCCAGGCATTAACCCGCGCTTC 492 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 ||||||||||| || || |||||||| || || ||||| || || ||||| || || || Sbjct 493 TTTAGCCAAAATATCGCGCAAAAACTCCCCGAGAAGAATATCCCTTCCACGCAAGCAAAG 552 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCACTTGAGAGCCCAGTTGGCC 119693 || | | ||||| ||||| | | || ||||| ||| || ||||| | |||| Sbjct 553 GCCACGATCCGCTCCGCAAACGATTCTGAGCCGTCGATCCAGCGTAGGGCCCACTGGGCC 612 Query 119694 TT 119695 || Sbjct 613 TT 614 >seq853 Length=703183 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| || ||||| | ||| || ||| ||||||||||| | || | ||| Sbjct 573569 CCCTCATCTCGCGAGATCAACTCGTTTGAGAACGTCAGTCCAGGCATTAACCCGCGCTTC 573628 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 ||||||||||| || || |||||||| || || ||||| || || ||||| || || || Sbjct 573629 TTTAGCCAAAATATCGCGCAAAAACTCCCCGAGAAGAATATCCCTTCCACGCAAGCAAAG 573688 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCACTTGAGAGCCCAGTTGGCC 119693 || | | ||||| ||||| | | || ||||| ||| || ||||| | |||| Sbjct 573689 GCCACGATCCGCTCCGCAAACGATTCTGAGCCGTCGATCCAGCGTAGGGCCCACTGGGCC 573748 Query 119694 TT 119695 || Sbjct 573749 TT 573750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588901288394400