Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq96 358 8e-94 >seq96 Length=556063 Score = 358 bits (396), Expect = 8e-94 Identities = 540/765 (71%), Gaps = 2/765 (0%) Strand=Plus/Plus Query 181424 TTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 181483 ||||| || | ||||||||| | | ||||| ||||| ||||| || |||||||| Sbjct 6932 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGC 6991 Query 181484 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTTTT 181543 ||| |||| ||||| ||| ||| | || | ||||| ||| ||| || || || ||| Sbjct 6992 CTATTTCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTCCACAGGTACAACCTTT 7051 Query 181544 GTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGGTGCTAATTTCCTT 181603 || || || ||||| ||||| | ||| || |||||| | || || ||| || | Sbjct 7052 GTAACTTCATGGTATACCCATGAATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTTTTA 7111 Query 181604 ACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 181663 || | || || || || || ||| | | | | || ||| | | |||| |||||| Sbjct 7112 ACCGTCGCAGTTTCCACTCCGGCTAATAGTTTAGCACACTCTTTATTGTTACTATGGGGT 7171 Query 181664 CCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTGTG 181723 ||| |||| || || || || || ||| ||| | || || || ||| ||||||| Sbjct 7172 CCTAAAGCACAAGGAGACTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTT 7231 Query 181724 GCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG- 181782 || || || || || |||| || || ||||||||| | | ||||||||||||||||| Sbjct 7232 GCTCTACATGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 7291 Query 181783 TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGT 181842 |||| || | | ||||| || ||||| || || || || ||| |||| ||| || || Sbjct 7292 TCTATTC-AATTGCGACCTTATAATGCAATCGCATTCTCTAGTCGAATTGTTGTTTTTGT 7350 Query 181843 CTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGG 181902 | |||||| || || ||||| || || || | ||||||| |||||||| ||||| || Sbjct 7351 TTATGTATTCCTAATTTATCCGCTAGGTCAGTTTGGTTGGTTTTTTGCGCCCAGTTTTGG 7410 Query 181903 TGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 181962 ||| || || || || || ||| | ||||| |||| || |||||||||||||| | || Sbjct 7411 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 7470 Query 181963 TCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCA 182022 || || ||||||||||| |||||||| | |||| | || | | | ||| ||||| Sbjct 7471 CCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGTGCTATTCA 7530 Query 182023 CGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAGC 182082 |||| || | || |||||| | | | |||| ||||| |||||||| ||| || Sbjct 7531 TGGTGCTACTATAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 7590 Query 182083 ATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTC 182142 || | ||||||||| |||||||| ||||||||||| || | || ||||| ||||| Sbjct 7591 TTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCACTAATCGCTTTTGGTC 7650 Query 182143 TCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTT 182187 || ||||| | |||| ||| |||||| | ||||| ||||| Sbjct 7651 CCAAATCTTTAGGGTTGCTTTTTCCAATAAATGTTGGTTACATTT 7695 Score = 147 bits (162), Expect = 3e-30 Identities = 185/254 (73%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 182183 CATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATT 182242 |||||||||||| | ||||| || || | | | | |||| ||| | | || | | Sbjct 8874 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTGTGGATGAGTGCTCTTGGAGTAGTC 8933 Query 182243 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAA 182302 ||||| || || ||||| ||||| |||||||| || || || |||||| | ||| | ||| Sbjct 8934 GGTCTGGCGCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 8993 Query 182303 GACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCA 182362 || | || || ||||| |||||||| || || |||||||| ||||||||| | ||||| Sbjct 8994 GATCTTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCT 9053 Query 182363 TGGTTAGCACCAGTCGATCAACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCC 182422 ||| | || | ||||| || ||||| ||| || | |||||||||| || ||||| Sbjct 9054 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAATCCCTGAGGAGGTTCTACCC 9113 Query 182423 AGAGGTAACGCACT 182436 | || ||||| || Sbjct 9114 CGTGGAAACGCTCT 9127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610319371165920