Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq96 363 2e-95 >seq96 Length=556063 Score = 363 bits (402), Expect = 2e-95 Identities = 536/754 (71%), Gaps = 4/754 (1%) Strand=Plus/Plus Query 165206 GATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 165265 ||||||||| | | || ||||| |||||||| ||||||||||| || |||| ||| Sbjct 6944 GATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGCCTATTTCTCTTT 7003 Query 165266 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 165325 || ||| ||| | ||| | || |||||| || || || || || | || ||| Sbjct 7004 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTCCACAGGTACAACCTTTGTAACTTCATGG 7063 Query 165326 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGTGCAAACTTTCTTACTGCGGCAGTT 165385 ||||| || | || |||||||||||| |||| || |||||| | || | |||||| Sbjct 7064 TATACCCATGAATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTTTTAACCGTCGCAGTT 7123 Query 165386 TCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAA 165445 || ||||| || | | | | || ||| | || | || ||||||||| | || ||| Sbjct 7124 TCCACTCCGGCTAATAGTTTAGCACACTCTTTATTGTTACTATGGGGTCCTAAAGCACAA 7183 Query 165446 GGGGA-TTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGG 165504 || || ||| || | ||| ||| | || || || ||| ||||||| || || || || Sbjct 7184 GGAGACTTTACTC-GTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTTGCTCTACATGG 7242 Query 165505 GGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCACG-TCTCATCGGTA 165563 ||||||| ||||| ||||| ||| | ||||| |||||| | || || ||| || | Sbjct 7243 CGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTATTCAAT- 7301 Query 165564 TCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTC 165623 | || || || ||||| || || |||||| ||| || | |||||||||| || || | Sbjct 7302 TGCGACCTTATAATGCAATCGCATTCTCTAGTCGAATTGTTGTTTTTGTTTATGTATTCC 7361 Query 165624 TCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAA 165683 | || || || || ||||| | |||||||||| || || ||| || || ||||| | Sbjct 7362 TAATTTATCCGCTAGGTCAGTTTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTA 7421 Query 165684 TCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCATA 165743 | || | ||| | ||||| | ||||| || ||||| ||||| ||||| || ||||||| Sbjct 7422 TATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATA 7481 Query 165744 TGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAG 165803 ||||||| ||||| || | |||| | ||| || | | ||| || ||||||| ||| Sbjct 7482 TGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGTGCTATTCATGGTGCTACTA 7541 Query 165804 TAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCTA 165863 |||| |||||| | | | |||||||||| | ||||||||| ||| || ||| || | | Sbjct 7542 TAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAA 7601 Query 165864 CTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTCG 165923 |||||| |||||||| || |||||||| || | || || || ||||| || ||||| Sbjct 7602 CTCAAGCTGAAGAAACTTATTCAATGGTCACCACTAATCGCTTTTGGTCCCAAATCTTTA 7661 Query 165924 GTATTGCGTTTAGTAATAAGAGGTGGTTGCATTT 165957 | |||| ||| ||||| | ||||| ||||| Sbjct 7662 GGGTTGCTTTTTCCAATAAATGTTGGTTACATTT 7695 Score = 161 bits (178), Expect = 1e-34 Identities = 188/254 (74%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 165953 CATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATT 166012 |||||||||||| | ||||| || || | | | | |||| ||| | | || | | Sbjct 8874 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTGTGGATGAGTGCTCTTGGAGTAGTC 8933 Query 166013 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAA 166072 ||||| || || ||||| ||||| |||||||| || || || || ||| | ||||| ||| Sbjct 8934 GGTCTGGCGCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 8993 Query 166073 GACCCAGAGTTTGAAACCTTCTACACGAAAAACATTCTCTTGAATGAAGGTCTTCGTGCT 166132 || | || ||||| || |||||||| ||||| |||||||| ||||||||| |||||||| Sbjct 8994 GATCTTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCT 9053 Query 166133 TGGTTGGCACCAGTCGATCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCTGCCT 166192 ||| |||| | ||||| || ||||| ||| || | ||||||| || ||||| || Sbjct 9054 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAATCCCTGAGGAGGTTCTACCC 9113 Query 166193 AGGGGTAACGCGCT 166206 | || ||||| || Sbjct 9114 CGTGGAAACGCTCT 9127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556854154089120