Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq96 376 3e-99 >seq96 Length=556063 Score = 376 bits (416), Expect = 3e-99 Identities = 539/754 (71%), Gaps = 4/754 (1%) Strand=Plus/Plus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 ||||||||| | |||| ||||| |||||||| ||||||||||| || |||| ||| Sbjct 6944 GATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGCCTATTTCTCTTT 7003 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || ||| ||| | ||| | || |||||| || || || | || || || ||| Sbjct 7004 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTCCACAGGTACAACCTTTGTAACTTCATGG 7063 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674 ||||| || | || |||||||||||| |||| ||| |||||| | || | |||||| Sbjct 7064 TATACCCATGAATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTTTTAACCGTCGCAGTT 7123 Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734 ||||| || || | | | || ||| | || | || ||||||||| | |||||| Sbjct 7124 TCCACTCCGGCTAATAGTTTAGCACACTCTTTATTGTTACTATGGGGTCCTAAAGCACAA 7183 Query 168735 GGGGA-TTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGG 168793 || || ||| || | ||||||||| | || || || ||| ||||||| || || || || Sbjct 7184 GGAGACTTTACTC-GTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTTGCTCTACATGG 7242 Query 168794 GGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTA 168852 ||||||| ||||| ||||| ||| | ||||| |||||||| || || ||| || | Sbjct 7243 CGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTATTCAAT- 7301 Query 168853 TCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTC 168912 | || || || ||||| || || |||||| ||| || | |||||||||| || || | Sbjct 7302 TGCGACCTTATAATGCAATCGCATTCTCTAGTCGAATTGTTGTTTTTGTTTATGTATTCC 7361 Query 168913 TCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAA 168972 | || || || || ||||| | |||||||||| || || ||| || || |||| | Sbjct 7362 TAATTTATCCGCTAGGTCAGTTTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTA 7421 Query 168973 TCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATA 169032 | || |||||| | ||||| | ||||| || ||||| |||||| |||| |||||||||| Sbjct 7422 TATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATA 7481 Query 169033 TGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAG 169092 ||||||| || || || | ||||| | || || | | ||| |||||||||| ||| Sbjct 7482 TGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGTGCTATTCATGGTGCTACTA 7541 Query 169093 TAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCA 169152 |||| |||||| | | | |||||||||| |||||||| ||| || ||| || | Sbjct 7542 TAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAA 7601 Query 169153 CTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTG 169212 |||| | || || || ||||||||||| || | || || || ||||| || |||||| Sbjct 7602 CTCAAGCTGAAGAAACTTATTCAATGGTCACCACTAATCGCTTTTGGTCCCAAATCTTTA 7661 Query 169213 GTATTGCGTTCAGTAATAAGAGGTGGTTGCATTT 169246 | |||| || ||||| | ||||| ||||| Sbjct 7662 GGGTTGCTTTTTCCAATAAATGTTGGTTACATTT 7695 Score = 170 bits (188), Expect = 2e-37 Identities = 190/254 (75%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 169242 CATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATT 169301 |||||||||||| | ||||| || || | | | | |||| ||| | | || | | Sbjct 8874 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTGTGGATGAGTGCTCTTGGAGTAGTC 8933 Query 169302 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAA 169361 ||||| || || ||||| ||||| |||||||| ||||| || || ||| | ||||| ||| Sbjct 8934 GGTCTGGCGCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 8993 Query 169362 GATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCA 169421 |||| || |||||||| ||||||||||| || || ||||| || |||||| ||||||| Sbjct 8994 GATCTTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCT 9053 Query 169422 TGGTTAGCACCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCCC 169481 ||| | || || ||||| |||||||| ||| || | |||||||||| || || ||| Sbjct 9054 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAATCCCTGAGGAGGTTCTACCC 9113 Query 169482 CGAGGTAATGCCCT 169495 || || || || || Sbjct 9114 CGTGGAAACGCTCT 9127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560536886875200