Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2255 105 4e-18 seq176 102 5e-17 seq736 96.9 2e-15 seq405 96.9 2e-15 seq1231 91.5 1e-13 seq297 91.5 1e-13 seq49 87.8 1e-12 seq113 86.0 4e-12 >seq2255 Length=141741 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || |||| || ||||| || || ||||| Sbjct 140509 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAG 140568 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||||||||||| ||||| |||||| Sbjct 140569 ATCAGCCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGGATCTTGGCTTTGACATTG 140628 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| | ||||| |||| ||| ||||| ||||| ||||| || |||||| Sbjct 140629 TCGATCGTGTCAGAGCTTTCAACCTCGAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACA 140688 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 140689 AAGATCTGCAT 140699 Score = 100 bits (110), Expect = 2e-16 Identities = 154/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || ||||||| ||| || ||||| ||||| ||||| | |||| | || |||| || Sbjct 95795 ACTAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTCA 95736 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| ||||| || || || ||||||||| | || | ||||||||||| Sbjct 95735 AGCTGCTTTCCAGCAAAGATGAGCCGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 95676 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 ||||| ||||| || | || || | ||| || ||||| || | ||| || || Sbjct 95675 ATCTTTGCCTTGAC--AT--TGTCAATAGTATCCGAGCTTTCAACTTCCAAGGTGATTGT 95620 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || ||||| ||||||||||||||| Sbjct 95619 CTTCCCTGTAAGGGTCTTGACAAAGATCTGCATA 95586 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| || || | ||| | || |||| || Sbjct 95339 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCATCCTCA 95280 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || | ||||||||| | || | || |||||||| Sbjct 95279 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 95220 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | ||| | ||||| |||| ||| ||||| || Sbjct 95219 ATCTTGGCTTTGACATTGTCAATGGTGTCAGAGCTTTCAACCTCGAGGGTGATGGTCTTG 95160 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||||||||||||||| Sbjct 95159 CCTGTGAGGGTTTTCACAAAGATCTGCAT 95131 Score = 93.3 bits (102), Expect = 3e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| || || | ||| | | |||| || ||||| || |||||||| Sbjct 96461 TCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCAAGCTGCTTACCGGCAAAG 96402 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||||||| | || | ||||||||||| |||||| || || || Sbjct 96401 ATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCAC--AT 96344 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 |||| || | ||| ||| || || | |||||||| || || || |||||||| Sbjct 96343 --TATCAATTGTATCCGAACTCTCCACCTCCAACGTTATGGTCTTGCCAGTCAGAGTCTT 96286 Query 34967 CACAAAGATCTGCAT 34981 ||||||||||||||| Sbjct 96285 CACAAAGATCTGCAT 96271 Score = 89.7 bits (98), Expect = 3e-13 Identities = 146/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||||||||| || || | ||| | | | || |||||||| Sbjct 139584 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCGTCCTCCAGCTG 139643 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || ||||| || || | ||||||||| | || | ||||||||||| |||||| Sbjct 139644 CTTACCCGCAAAGATGAGCCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTT 139703 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 ||| || || |||| || ||| ||| || || | ||||| || || | Sbjct 139704 AGCTTTCAC--AT--TATCAATGGTATCAGAACTCTCCACCTCCAGAGTTATCGTCTTCC 139759 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| |||||||||||||||||||| Sbjct 139760 CAGTGAGGGTCTTCACAAAGATCTGCAT 139787 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| ||||| | |||| | || |||| || Sbjct 95567 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTCA 95508 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| ||||| || || | ||||||||| | || | ||||||||||| Sbjct 95507 AGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 95448 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 ||||| ||||| || | || || | ||| || ||||| || | ||| || || Sbjct 95447 ATCTTTGCCTTGAC--AT--TGTCAATAGTATCCGAGCTTTCAACTTCCAAGGTGATTGT 95392 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || ||||| ||||| || |||||| Sbjct 95391 CTTCCCGGTAAGGGTCTTGACAAATATTTGCATA 95358 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || ||||||| || ||| || ||||| || || || | ||| | || |||| || Sbjct 140263 ACTAAGTGAAGGGTTGATTCCTTTTGAATATTGTAATCAGCCAGGGTGCGGCCATCCTCA 140322 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || | ||||||||| | || | ||||| ||||| Sbjct 140323 AGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGG 140382 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | |||| || | |||||| || | || ||||| ||| Sbjct 140383 ATCTTAGCCTTGACATTATCAATCGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTCTTT 140442 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||||||||| ||||| || ||||| Sbjct 140443 CCGGTGAGAGTCTTAACAAATATTTGCAT 140471 >seq176 Length=136227 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || ||||| || | |||| | || |||| || |||||||| |||||||| Sbjct 88427 TCGTTCTGGATATTATAATCTGCAAGGGTACGACCATCCTCAAGCTGTTTCCCGGCAAAG 88486 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | |||||||| | || | |||||||||||| |||||| |||||| Sbjct 88487 ATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCTTGAATCTTAGCTTTGACATTG 88546 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | |||||| || | || ||||| || || || || ||||||||| Sbjct 88547 TCAATAGTGTCAGAGCTCTCAACCTCCAGAGTAATGGTCTTCCCAGTCAGGGTCTTCACA 88606 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 88607 AAAATCTGCAT 88617 >seq736 Length=481145 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | |||| | || |||| || ||||| ||||||||||| Sbjct 406514 TCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCGAGCTGCTTTCCGGCAAAG 406573 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||||||| | || | |||||||| || |||||| |||||| Sbjct 406574 ATCAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTATCTTGAATCTTAGCCTTGACGTTG 406633 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | || || || | ||| ||||| || || ||||| ||||| || Sbjct 406634 TCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 406693 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 406694 AAGATCTGCAT 406704 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| || | ||| || ||||| ||||| ||||| | ||| | || |||| ||| Sbjct 406268 ACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTCC 406327 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || | | ||||||||| | || | ||||||||||| Sbjct 406328 AGCTGCTTCCCTGCAAAGATCAACCTTTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGG 406387 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 |||||| ||||| || | || || | ||| || ||| || || | || ||||| Sbjct 406388 ATCTTCGCCTTGAC--AT--TGTCAATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGT 406443 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || || ||||||||||| ||||||||| Sbjct 406444 CTTTCCTGTCAGGGTCTTCACAAAAATCTGCATA 406477 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || |||| |||||||| || ||||| || Sbjct 406742 TCCTTCTGGATGTTGTAGTCTGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAG 406801 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||||||| | || | || |||||||| ||| || |||||| Sbjct 406802 ATCAGCCTCTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGAATTTTGGCCTTGACGTTG 406861 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | || || |||| ||| ||||| || || ||||| ||||| || Sbjct 406862 TCAATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTCTTACCGGTGAGGGTCTTGACG 406921 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 406922 AAGATCTGCATA 406933 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||||||||| | || | | | |||| |||| ||| || |||||||| Sbjct 405830 TCCTTCTGAATGTTATAGTCAGCCAGAGTCCTTCCATCCTCCAACTGCTTACCGGCAAAG 405889 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | ||||||||| | || | || |||||||| ||||| || || Sbjct 405890 ATCAACCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTGGCCTTCAC---- 405945 Query 34911 GCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| || ||| || || | || ||||| ||||| || | ||||| Sbjct 405946 GTTGTCGATTGTGTCCGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTT 406005 Query 34967 CACAAAGATCTGCATA 34982 |||||||||||||||| Sbjct 406006 CACAAAGATCTGCATA 406021 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| |||||||| || Sbjct 406970 TCCTTCTGGATGTTGTAGTCTGCGAGGGTACGGCCGTCCTCTAGCTGCTTTCCGGCGAAG 407029 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| ||| | || | ||||||||||| ||||| |||||| Sbjct 407030 ATGAGACGCTGCTGATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTG 407089 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || || | ||| ||||| || || || || || ||||| Sbjct 407090 TCGATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACG 407149 Query 34971 AAGATCTGCAT 34981 ||||| ||||| Sbjct 407150 AAGATTTGCAT 407160 Score = 82.4 bits (90), Expect = 5e-11 Identities = 163/234 (70%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG-- 34812 || ||||||| | || || | ||||| || || |||||||| || ||||| | Sbjct 406022 CCACCCCTCAGACGCAGCACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGCC 406081 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| | || | || |||||||| || || ||||| || | | ||||||||| | | Sbjct 406082 AAAG--TACGGCCGTCCTCCAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCTGGTG 406139 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-C 34928 | | |||||||||||| |||||| || || || | ||||| | ||| || | Sbjct 406140 GGATCCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT--TGTCGATGGTGTCCGAGCTC 406195 Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | || || || ||||| || || |||||||| |||||||||||| Sbjct 406196 TCGACCTCCAAAGTGATAGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCATA 406249 >seq405 Length=713653 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/199 (72%), Gaps = 8/199 (4%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| | ||| |||| | || || ||||| || || || || Sbjct 410342 TTCCTTCTGGATGTTGTAGTCAGCTAGGGTTCGGCCGTCCTCGAGCTGCTTCCCTGCGAA 410401 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || |||||||||||| | || | ||||||||||| ||||| ||| || | Sbjct 410402 GATGAGACGTTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCTTTCAC--A 410459 Query 34910 TGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| | ||| | |||||| || | |||||| || || ||||| || || | Sbjct 410460 T--TGTCGATGGTGTCCGAAGACTCAACCTCTAGGGTTATAGTCTTCCCCGTTAGGGTTT 410517 Query 34966 TCACAAAGATCTGCATATT 34984 | || ||||||||||| || Sbjct 410518 TGACGAAGATCTGCATCTT 410536 >seq1231 Length=361431 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 34747 AATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTT 34804 |||||| |||||||||||| ||||||||||||||||| ||| || || |||||||| Sbjct 154346 AATCATAGTTCCTCCCCTCAGCCTCAAAACCAAGTGAAGTGTTGACTCCTTTTGAATGTT 154405 Query 34805 ATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTG 34864 ||| || | ||| |||| |||| |||| || || || ||||| || | || || || Sbjct 154406 ATAATCTGCAAGAGTTCGACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTG 154465 Query 34865 GTCTTGCGGCACCCCCTCCTTGTC 34888 ||| | || | || ||||| || Sbjct 154466 GTCAGGAGGGATGCCTTCCTTATC 154489 >seq297 Length=529300 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| || || | ||| |||| | || || ||||| || ||||| || Sbjct 439837 TTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 439778 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||||||| | || | ||||||||||| ||||| || || | Sbjct 439777 GATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTCAC--A 439720 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| ||| || ||| || || | ||| ||||| || ||||| || || | Sbjct 439719 T--TGTCGATGGTGTCAGAGGACTCGACCTCTAGGGTAATGGTCTTACCCGTTAGGGTTT 439662 Query 34966 TCACAAAGATCTGCATATT 34984 |||| ||||||||||| || Sbjct 439661 TCACGAAGATCTGCATGTT 439643 >seq49 Length=410483 Score = 87.8 bits (96), Expect = 1e-12 Identities = 139/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 ||||||| ||||||||||| | | | | || |||| || ||||| || || ||||| | Sbjct 303008 CTTTCTGGATGTTATAGTCAGCCAAGGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAAA 302949 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | | || ||||||||| | || | ||||||||||| ||||| ||||| || Sbjct 302948 TCAAACGCTGCTGGTCTGGTGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGAC--AT- 302892 Query 34912 CTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | ||||| || | | ||| || |||| || ||||| || || || || |||||| Sbjct 302891 -TGTCGATGGTGTCGCTGCTCTCGACCTCGAGAGTGATGGTCTTCCCGGTTAGGGTCTTC 302833 Query 34968 ACAAAGATCTGCATATT 34984 || || |||||||| || Sbjct 302832 ACGAAAATCTGCATCTT 302816 >seq113 Length=202937 Score = 86.0 bits (94), Expect = 4e-12 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 34747 AATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTT 34804 |||||| |||||||||||| ||||||||||| ||||| || || ||||| ||||| Sbjct 28777 AATCATAGTTCCTCCCCTCAGCCTCAAAACCAGGTGAAGCGTTGACTCCTTCTGGATGTT 28836 Query 34805 ATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTG 34864 ||| || | ||| |||| |||| |||| || || || ||||| || | || ||||| Sbjct 28837 ATAATCTGCAAGAGTTCGGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTCTGCTG 28896 Query 34865 GTCTTGCGGCACCCCCTCCTTGTC 34888 ||| | || | || ||||| || Sbjct 28897 GTCAGGAGGGATGCCTTCCTTATC 28920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324593449722144