Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7758 172 1e-37 seq853 172 1e-37 >seq7758 Length=1097 Score = 172 bits (190), Expect = 1e-37 Identities = 564/866 (65%), Gaps = 28/866 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || || ||||| ||||| || |||||||||| ||| ||| ||| Sbjct 123 CTGGTACTCCCCAACCCTCTTCTCGAAGAAATTGGTCTTCCCCTGCAAGCTGATCAGCTC 182 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACA----CCCGTGTCAGGCCCATCTGTTCCA 47954 ||| | ||| ||||| | || |||| ||||| | | | || ||| Sbjct 183 CATCCATTCGAACGGGTTCTGCACATTGTACATCTTCCCGTACC----CAAGCTCAGCCA 238 Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014 |||| |||||| ||| |||||||||| | ||| || | |||||| || | | Sbjct 239 GCAGCCTATCCGCCACGAACTCGATGTACTGGCTCATTAGATCGCCGTTCATCCCCACCA 298 Query 48015 GGGA-CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 ||| ||||| || || | | ||||| ||||||||| ||| || | | | Sbjct 299 GGGCGCACGGT-AACGCTTCGCACACGAACTCTCTCTCTATCTCCACCGCGTTTCGTATG 357 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 ||| ||| || || ||| | || || | ||| || | || |||| ||| Sbjct 358 ATCGACTTCACCCGATCCTCGCTCAGCTTCTTCCTCAGCAGCGAG---TACAGCAAGCAC 414 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| | |||||| || || || || ||| | | |||| ||||| || ||| Sbjct 415 GCGAAGTCGCAGTGCAAACCCTCATCTCGCGAGATCAACTCGTTTGAGAACGTCAGTCCA 474 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | ||| | || || ||||| || || || ||| || |||||||| || Sbjct 475 GGCATTAACCCGCGCTTCTTTAGCCAAAATATCGCGCAAAAACTCCCCGAGAAGAATATC 534 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA-GAT 48312 || ||||| || || || || || ||| | || || |||| | | ||| Sbjct 535 CCTTCCACGCAAGCAAAGGCCACGATCCGCTCCGCAAACGA----TTCTGAGCCGTCGAT 590 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 |||| || ||||| | ||||||||| ||| ||| || || || || || || | || Sbjct 591 CCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGATCGCATGAAA 650 Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT----AGTGAGCAGCTTTGCGTACA 48428 ||| | || ||| ||| |||| | ||||| || ||| || | ||||| Sbjct 651 AAGCCTGTTCTTCTCGTCTGAGTCCTTGATGTAGGTCTCCAG-GAGGAGGCT---GTACA 706 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||||| ||||||||||| | ||||| | | Sbjct 707 TCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCTCGAGCCTCGGAGA 766 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCA 48547 |||| ||||| | ||| || ||| || |||||||| || || || || || ||| Sbjct 767 CCTGGACTTCCTTCATGAACCT-TCCGGCGAGATTCTCCAAAACAATGCCGTCAGAGGCA 825 Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAG 48607 || |||||||| || || || | | ||| || |||| | ||| ||| | |||| Sbjct 826 GCGAAGAAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCGGGGGCTAGAAGTTCCCAG 885 Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTT 48667 ||| ||| | || | || || || || | ||||||||||| || || || Sbjct 886 TGGCGTAGGTCCTGGCATAAATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTC 945 Query 48668 TTGTACATGCCCCATATGTCCGGATA 48693 |||||||| |||| || ||||| || Sbjct 946 TTGTACATCTCCCAGATTTCCGGGTA 971 >seq853 Length=703183 Score = 172 bits (190), Expect = 1e-37 Identities = 564/866 (65%), Gaps = 28/866 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| || || ||||| ||||| || |||||||||| ||| ||| ||| Sbjct 573259 CTGGTACTCCCCAACCCTCTTCTCGAAGAAATTGGTCTTCCCCTGCAAGCTGATCAGCTC 573318 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACA----CCCGTGTCAGGCCCATCTGTTCCA 47954 ||| | ||| ||||| | || |||| ||||| | | | || ||| Sbjct 573319 CATCCACTCGAACGGGTTCTGCACATTGTACATCTTCCCGTACC----CAAGCTCAGCCA 573374 Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014 |||| |||||| ||| |||||||||| | ||| || | |||||| || | | Sbjct 573375 GCAGCCTATCCGCCACGAACTCGATGTACTGGCTCATTAGATCGCCGTTCATCCCCACCA 573434 Query 48015 GGGA-CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 ||| ||||| || || | | ||||| ||||||||| ||| || | | | Sbjct 573435 GGGCGCACGGT-AACGCTTCGCACACGAACTCTCTCTCTATCTCCACCGCGTTTCGTATG 573493 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 ||| ||| || || ||| | || || | ||| || | || |||| ||| Sbjct 573494 ATCGACTTCACCCGATCCTCGCTCAGCTTCTTCCTCAGCAGCGAG---TACAGCAAGCAC 573550 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| | |||||| || || || || ||| | | |||| ||||| || ||| Sbjct 573551 GCGAAGTCGCAGTGCAAACCCTCATCTCGCGAGATCAACTCGTTTGAGAACGTCAGTCCA 573610 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | ||| | || || ||||| || || || ||| || |||||||| || Sbjct 573611 GGCATTAACCCGCGCTTCTTTAGCCAAAATATCGCGCAAAAACTCCCCGAGAAGAATATC 573670 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA-GAT 48312 || ||||| || || || || || ||| | || || |||| | | ||| Sbjct 573671 CCTTCCACGCAAGCAAAGGCCACGATCCGCTCCGCAAACGA----TTCTGAGCCGTCGAT 573726 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 |||| || ||||| | ||||||||| ||| ||| || || || || || || | || Sbjct 573727 CCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGATCGCATGAAA 573786 Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT----AGTGAGCAGCTTTGCGTACA 48428 ||| | || ||| ||| |||| | ||||| || ||| || | ||||| Sbjct 573787 AAGCCTGTTCTTCTCGTCTGAGTCCTTGATGTAGGTCTCCAG-GAGGAGGCT---GTACA 573842 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||||| ||||||||||| | ||||| | | Sbjct 573843 TCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCTCGAGCCTCGGAGA 573902 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCA 48547 |||| ||||| | ||| || ||| || |||||||| || || || || || ||| Sbjct 573903 CCTGGACTTCCTTCATGAACCT-TCCGGCGAGATTCTCCAAAACAATGCCGTCAGAGGCA 573961 Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAG 48607 || |||||||| || || || | | ||| || |||| | ||| ||| | |||| Sbjct 573962 GCGAAGAAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCGGGGGCTAGAAGTTCCCAG 574021 Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTT 48667 ||| ||| | || | || || || || | ||||||||||| || || || Sbjct 574022 TGGCGTAGGTCCTGGCATAAATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTC 574081 Query 48668 TTGTACATGCCCCATATGTCCGGATA 48693 |||||||| |||| || ||||| || Sbjct 574082 TTGTACATCTCCCAGATTTCCGGGTA 574107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931414635064320