Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7758 185 2e-41 seq853 185 2e-41 >seq7758 Length=1097 Score = 185 bits (204), Expect = 2e-41 Identities = 391/574 (68%), Gaps = 11/574 (2%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || |||||||||||||||||||| | ||| |||||||||||| ||| ||||| Sbjct 965 GAAATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGTTGAT 906 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 | | ||||| | | |||| | |||| || | |||| |||| || ||| Sbjct 905 TTATGCCAGGACCTACGCCACTGGGAACTTCTAGCCCCCGGCGAGAAGCACTTCATCACC 846 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 ||||| | || ||||| || |||||||| || || || |||||||| || || Sbjct 845 CACGTGCTCGCCTTCTTCGCTGCCTCTGACGGCATTGTTTTGGAGAATCTCGCCGGAAGG 786 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGC-CAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 |||| | |||||| ||| | ||||| | || |||||||| |||||||| ||||| Sbjct 785 TTCATGAAGGAAGTCCAGGTCTCCGAGGCTCGAG-CCTTCTACGGCTTCCAGATCGCCAT 727 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGC 25772 ||| || | ||||| ||| |||| | || ||| ||| ||||| | ||| | Sbjct 726 CGAGAACATCCACTCCGAGATGTACAGCCTCCTCCTGGAGACCTACATCAAGGACTCAGA 667 Query 25773 CGAGAGAGATC-GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGC 25831 ||||| ||| | |||| ||| ||| ||||| ||| ||| || ||| || |||||| | Sbjct 666 CGAGA-AGAACAGGCTTTTTCATGCGATCGATACCATTCCCTGCGTCACGAAGAAGGCCC 608 Query 25832 GGTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 ||||||| | |||||| || || |||| |||||| |||||| | || ||| Sbjct 607 AGTGGGCCCTACGCTGGATCGACGGCTCAGA----ATCGTTTGCGGAGCGGATCGTGGCC 552 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTC-AGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 |||||| ||||| || || || ||| | || ||||| || || || ||||| || Sbjct 551 TTTGCTTGCGTGGAAGGGATATTCTTCTCGGGGAGTTTTTGC-GCGATATTTTGGCTAAA 493 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || ||| ||||| || ||| || || |||||| | ||| | || ||||| Sbjct 492 GAAGCGCGGGTTAATGCCTGGACTGACGTTCTCAAACGAGTTGATCTCGCGAGATGAGGG 433 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACG 26043 | | ||| | || || || ||| |||| ||| || Sbjct 432 TTTGCACTGCGACTTCGCGTGCTTGCTGTACTCG 399 >seq853 Length=703183 Score = 185 bits (204), Expect = 2e-41 Identities = 391/574 (68%), Gaps = 11/574 (2%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || |||||||||||||||||||| | ||| |||||||||||| ||| ||||| Sbjct 574101 GAAATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGTTGAT 574042 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 | | ||||| | | |||| | |||| || | |||| |||| || ||| Sbjct 574041 TTATGCCAGGACCTACGCCACTGGGAACTTCTAGCCCCCGGCGAGAAGCACTTCATCACC 573982 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 ||||| | || ||||| || |||||||| || || || |||||||| || || Sbjct 573981 CACGTGCTCGCCTTCTTCGCTGCCTCTGACGGCATTGTTTTGGAGAATCTCGCCGGAAGG 573922 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGC-CAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 |||| | |||||| ||| | ||||| | || |||||||| |||||||| ||||| Sbjct 573921 TTCATGAAGGAAGTCCAGGTCTCCGAGGCTCGAG-CCTTCTACGGCTTCCAGATCGCCAT 573863 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGC 25772 ||| || | ||||| ||| |||| | || ||| ||| ||||| | ||| | Sbjct 573862 CGAGAACATCCACTCCGAGATGTACAGCCTCCTCCTGGAGACCTACATCAAGGACTCAGA 573803 Query 25773 CGAGAGAGATC-GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGC 25831 ||||| ||| | |||| ||| ||| ||||| ||| ||| || ||| || |||||| | Sbjct 573802 CGAGA-AGAACAGGCTTTTTCATGCGATCGATACCATTCCCTGCGTCACGAAGAAGGCCC 573744 Query 25832 GGTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 ||||||| | |||||| || || |||| |||||| |||||| | || ||| Sbjct 573743 AGTGGGCCCTACGCTGGATCGACGGCTCAGA----ATCGTTTGCGGAGCGGATCGTGGCC 573688 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTC-AGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 |||||| ||||| || || || ||| | || ||||| || || || ||||| || Sbjct 573687 TTTGCTTGCGTGGAAGGGATATTCTTCTCGGGGAGTTTTTGC-GCGATATTTTGGCTAAA 573629 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || ||| ||||| || ||| || || |||||| | ||| | || ||||| Sbjct 573628 GAAGCGCGGGTTAATGCCTGGACTGACGTTCTCAAACGAGTTGATCTCGCGAGATGAGGG 573569 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACG 26043 | | ||| | || || || ||| |||| ||| || Sbjct 573568 TTTGCACTGCGACTTCGCGTGCTTGCTGTACTCG 573535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928726976037120