Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq96 327 1e-84 seq938 109 6e-19 >seq96 Length=556063 Score = 327 bits (362), Expect = 1e-84 Identities = 531/764 (70%), Gaps = 0/764 (0%) Strand=Plus/Plus Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176 |||||| | | || |||||| | || |||||||| |||||||| || |||||||| Sbjct 6932 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGC 6991 Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236 || |||| ||||| ||| ||| | ||| | ||||||||| || || || || || Sbjct 6992 CTATTTCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTCCACAGGTACAACCTTT 7051 Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTT 162296 || || |||||||| || | | | || ||||||||| | || || |||||| | Sbjct 7052 GTAACTTCATGGTATACCCATGAATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTTTTA 7111 Query 162297 ACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGT 162356 || | |||||||| ||||| || | | | | || ||| | || | ||||||||| Sbjct 7112 ACCGTCGCAGTTTCCACTCCGGCTAATAGTTTAGCACACTCTTTATTGTTACTATGGGGT 7171 Query 162357 CCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTG 162416 ||| | | ||||| ||||| | || ||||| ||| | || || || ||||||||||| Sbjct 7172 CCTAAAGCACAAGGAGACTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTT 7231 Query 162417 GCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA 162476 || || || || || || | ||| |||||||| ||| | || || |||||||| || ||| Sbjct 7232 GCTCTACATGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 7291 Query 162477 CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTT 162536 ||| | || ||||| ||||| || || ||||| ||| |||| ||| || ||| Sbjct 7292 TCTATTCAATTGCGACCTTATAATGCAATCGCATTCTCTAGTCGAATTGTTGTTTTTGTT 7351 Query 162537 AGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGG 162596 ||| || || || ||||| | || || | ||||| || || || || || Sbjct 7352 TATGTATTCCTAATTTATCCGCTAGGTCAGTTTGGTTGGTTTTTTGCGCCCAGTTTTGGT 7411 Query 162597 GTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAAT 162656 || ||||| || || |||||| | ||||| |||||||||| ||||| ||||| | || Sbjct 7412 GTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 7471 Query 162657 CCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCAT 162716 || ||||| |||||||| || || || | | || | ||| || | | |||||||||| Sbjct 7472 CCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGTGCTATTCAT 7531 Query 162717 GGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGCA 162776 || | || | |||||||| | | |||||||| || ||||| || || || Sbjct 7532 GGTGCTACTATAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 7591 Query 162777 TTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTCA 162836 ||| || | || || | |||||||| ||||| ||||| || | || ||||| ||||| Sbjct 7592 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCACTAATCGCTTTTGGTCC 7651 Query 162837 CAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTT 162880 || || || | |||||||| || || ||||||| ||||| Sbjct 7652 CAAATCTTTAGGGTTGCTTTTTCCAATAAATGTTGGTTACATTT 7695 Score = 129 bits (142), Expect = 6e-25 Identities = 181/254 (71%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 162876 CATTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATT 162935 |||||||||||| | ||||| || || | | | | |||| ||| || | || | | Sbjct 8874 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTGTGGATGAGTGCTCTTGGAGTAGTC 8933 Query 162936 GGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAA 162995 || || || || || || ||||| || ||||| || ||||| ||| | ||||| || ||| Sbjct 8934 GGTCTGGCGCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 8993 Query 162996 GACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCA 163055 || | ||| |||||||| ||||| || || || ||||| | |||||||| |||| || Sbjct 8994 GATCTTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCT 9053 Query 163056 TGGTTAGCACCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCA 163115 ||| | || | || || |||||||| ||| || | ||||||| ||||| | || Sbjct 9054 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAATCCCTGAGGAGGTTCTACCC 9113 Query 163116 AGAGGCAACGCTCT 163129 | || |||||||| Sbjct 9114 CGTGGAAACGCTCT 9127 >seq938 Length=1460269 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 158341 TACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGGC 158400 ||||| |||||||| || ||||| || ||| |||| || ||||| ||| | || || Sbjct 244833 TACATTCTTGACGCCGCGGAGGAGGCCGGTATCGACCTACCCTACTCTTGCAGGGCTGGT 244892 Query 158401 GCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 158460 |||| || || ||||| || ||| | || || || ||||| || ||| | Sbjct 244893 TCTTGCTCTTCATGTGCTGGCAAAGTTGTGGAAGGGGGTGTGGACCAGTCAGATCAGAGC 244952 Query 158461 TTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCTTATCCTACA 158520 ||||| || ||||| || || ||| ||| || | || |||||||| |||||||| || Sbjct 244953 TTCCTTGATGATGAACAGATTGATGGTGGATTTGTCCTTACTTGTGTGGCTTATCCTTCA 245012 Query 158521 AGTGATTGTGTGATTGAGACTGACAAGGAAGAGGAACT 158558 |||| |||| ||||||| ||||||||||||| || Sbjct 245013 TCTGATGTTGTGCTTGAGACCCACAAGGAAGAGGAGCT 245050 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 158341 TACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGGC 158400 ||||| |||||||| || ||||| || ||| |||| || ||||| ||| | || || Sbjct 250364 TACATTCTTGACGCCGCGGAGGAGGCCGGTATCGACCTACCCTACTCTTGCAGGGCTGGT 250423 Query 158401 GCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 158460 |||| || || ||||| || ||| | || || || ||||| || ||| | Sbjct 250424 TCTTGCTCTTCATGTGCTGGCAAAGTTGTGGAAGGGGGTGTGGACCAGTCAGATCAGAGC 250483 Query 158461 TTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCTTATCCTACA 158520 ||||| || ||||| || || ||| ||| || | || |||||||| |||||||| || Sbjct 250484 TTCCTTGATGATGAACAGATTGATGGTGGATTTGTCCTTACTTGTGTGGCTTATCCTTCA 250543 Query 158521 AGTGATTGTGTGATTGAGACTGACAAGGAAGAGGAACT 158558 |||| |||| ||||||| ||||||||||||| || Sbjct 250544 TCTGATGTTGTGCTTGAGACCCACAAGGAAGAGGAGCT 250581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547677718267680