Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq96 340 2e-88 seq211 91.5 2e-13 >seq96 Length=556063 Score = 340 bits (376), Expect = 2e-88 Identities = 536/765 (70%), Gaps = 2/765 (0%) Strand=Plus/Minus Query 101959 AAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAGAAACGGTTT 102018 ||||| ||||| | ||||| ||| |||| | ||||||||| ||||| || || || Sbjct 7695 AAATGTAACCAACATTTATTGGAAAAAGCAACCCTAAAGATTTGGGACCAAAAGCGATTA 7636 Query 102019 GCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTGAAAGTGTTT 102078 | || |||||||||||||| ||||| |||| || | | || || ||| || ||| Sbjct 7635 GTGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGGAATGTATTT 7576 Query 102079 GCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATTGCTGACAGC 102138 || ||||||||||||| | | ||| || || | ||| |||| || || || | | | Sbjct 7575 GCACCATCACCATCTTCAAATAAAGTATTTTCTATAGTAGCACCATGAATAGCACATAAC 7516 Query 102139 AGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGCGTCCAGTTA 102198 || || | |||| | || ||||| ||||||||||| |||||||| | ||||| ||| Sbjct 7515 AGAGCAGCGCCCAACACCCCAGCAACTCCCATCATATGAAATGGGTTCAATGTCCAATTA 7456 Query 102199 TGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAACGAGGGCGCA 102258 || || || || | ||||| | ||||| |||||| ||||| |||||||| ||||||| Sbjct 7455 TGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCTGCTACACCAAAACTGGGCGCA 7396 Query 102259 AAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAAACAGCGATA 102318 || ||||||| |||| || || ||||| || || || ||| ||||||||| | || Sbjct 7395 AAAAACCAACCAAACTGACCTAGCGGATAAATTAGGAATACATAAACAAAAACAACAATT 7336 Query 102319 GGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCCAACTCGAAT 102378 | | |||||| || || ||||| || || || | | ||| | | ||| | || ||| Sbjct 7335 CGACTAGAGAATGCGATTGCATTATAAGGTCGCAATTGAATAGATCGAGCAAGTTCAAAT 7276 Query 102379 TGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAAGCCCAGAGT 102438 ||||| | ||| ||||| || || | || || || || ||||| ||||||| ||| || Sbjct 7275 TGACGTAACATAAAACCTATTAGTCCGAAAGCGCCATGTAGAGCAACAAAAGTCCATAGA 7216 Query 102439 CCCCCAAGTTGGACCCACCTGACGAAA-TCTCCTTGAGCTTCAGGACCCCAAAGTAGAAG 102497 || || | ||| ||| | || ||| |||||||| |||| ||||||||| |||| | Sbjct 7215 CCGCCTAATTGACACCAAC-GAGTAAAGTCTCCTTGTGCTTTAGGACCCCATAGTAACAA 7157 Query 102498 AAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAATTAGCACC 102557 | ||| || | | | | ||| || || || || || | || | || ||| || Sbjct 7156 TAAAGAGTGTGCTAAACTATTAGCCGGAGTGGAAACTGCGACGGTTAAAAAGTTACAGCC 7097 Query 102558 TTCAAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAACGTCGTGCCAGT 102617 ||| | || | || | | ||||||||||| ||||| |||| || || || || Sbjct 7096 TTCCAAATAGGAACTTGCTAATTCATGGGTATACCATGAAGTTACAAAGGTTGTACCTGT 7037 Query 102618 AAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCAGACCAACCCAC 102677 ||| ||||| | |||| ||| ||| ||||| |||| ||| ||||||||||| || Sbjct 7036 GGACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGAAATAGGCCAGACCAACCTAC 6977 Query 102678 AAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAA 102722 ||| ||||| || || | | ||||||||||| || ||||| Sbjct 6976 AAAAACAAAACGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 6932 Score = 152 bits (168), Expect = 7e-32 Identities = 186/254 (73%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | || | ||||| ||||| | || || ||||||||| || ||||| Sbjct 9127 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGATTATAAGGTTTTCATGAGGCTGATCT 9068 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | |||| ||| ||||| | ||||||||| || || || || || |||||||| ||| Sbjct 9067 TGAGCCGCCATCCAAGCACGAATACCTTCATTTAAGAGAATATTTTTGGTGTAGAAAGTC 9008 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || || || ||||||| ||||| | ||| || || || || |||||||| ||||| ||| Sbjct 9007 TCAAATTCAAGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCACGTAGG 8948 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || || || ||||| | | || | | ||| |||||| | | | || || ||||| Sbjct 8947 TTCAGCGCCAGACCGACTACTCCAAGAGCACTCATCCACAAAACGGTTACTGGTACAAAT 8888 Query 101950 AGCATAAAGAAATG 101963 | |||||||||||| Sbjct 8887 AACATAAAGAAATG 8874 >seq211 Length=154590 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/141 (76%), Gaps = 4/141 (3%) Strand=Plus/Minus Query 102223 AATCTAAATATCGCTGCAACACCAAACGAGGGCGCAAAGAACCAACTGGACTGTCCGAGA 102282 |||| |||||| ||||| |||||||| |||||| || |||||| ||||| || || Sbjct 29779 AATCGAAATATAGCTGCTACACCAAAACTGGGCGCCAAAAACCAAGCAGACTGACCTAGC 29720 Query 102283 GGATAGATGAGAAACACACTGACAAAAACAGCGATAGGCCCAGAGAACGCAA-TAGCATT 102341 ||||| || || || ||| ||||||||||| || | || ||||| |||| | ||||| Sbjct 29719 GGATAAATTAGGAATACAGAAACAAAAACAGCAATTAGACCGGAGAATGCAATTCGCATT 29660 Query 102342 GTAC-GGACGAATTCCAATTA 102361 | || ||| |||| |||||| Sbjct 29659 GAACAGGAAGAAT--CAATTA 29641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633433238799840