Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq96 318 6e-82 seq938 105 7e-18 >seq96 Length=556063 Score = 318 bits (352), Expect = 6e-82 Identities = 526/754 (70%), Gaps = 4/754 (1%) Strand=Plus/Plus Query 159306 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGACTACTACTTCTT 159365 ||||||||| | | || || ||||||||||| || |||||||| ||| | || || Sbjct 6944 GATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGCCTATTTCTCTTT 7003 Query 159366 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 159425 || ||| ||| | || | || |||||| || || ||| | ||||| || ||| Sbjct 7004 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTCCACAGGTACAACCTTTGTAACTTCATGG 7063 Query 159426 TACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTCACAGCAGCTGTC 159485 || ||||| | | || ||||||||| | || || ||||||| | || | || || Sbjct 7064 TATACCCATGAATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTTTTAACCGTCGCAGTT 7123 Query 159486 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC-A 159544 || || || ||| | | | | || ||| | | |||| ||||||||| | | | | Sbjct 7124 TCCACTCCGGCTAATAGTTTAGCACACTCTTTATTGTTACTATGGGGTCCTAAAGCACAA 7183 Query 159545 GGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGG 159604 || || ||| | || ||||| ||| | || || |||||| |||||| || || || || Sbjct 7184 GGAGACTTTAC-TCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTTGCTCTACATGG 7242 Query 159605 TGCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACG-TCTCATTGGTA 159663 || |||| ||||| ||||| ||| | ||||| |||||||| || || ||| ||| Sbjct 7243 CGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCT-ATTCAAT 7301 Query 159664 TCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCC 159723 | || ||||| ||||| || || |||||| ||| |||| ||||||||| || |||| Sbjct 7302 TGCGACCTTATAATGCAATCGCATTCTCTAGTCGAATTGTTGTTTTTGTTTATGTATTCC 7361 Query 159724 TCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAA 159783 | || || || | ||||||| |||||||||| || || ||||| || ||||| | Sbjct 7362 TAATTTATCCGCTAGGTCAGTTTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTA 7421 Query 159784 TCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCATA 159843 | ||| ||||| | | || | ||||| ||||| || ||||| || || || || |||| Sbjct 7422 TATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATA 7481 Query 159844 TGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTACTG 159903 |||||||||||||||| | | || | || || | |||| || ||||| | |||| Sbjct 7482 TGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGTGCTATTCATGGTGCTACTA 7541 Query 159904 TAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCAA 159963 |||| || || | | ||||||||| || |||||||| || || ||| | ||| Sbjct 7542 TAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAA 7601 Query 159964 CTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCG 160023 |||||| || || ||||| || |||||||| | || ||||| ||||| || ||||| Sbjct 7602 CTCAAGCTGAAGAAACTTATTCAATGGTCACCACTAATCGCTTTTGGTCCCAAATCTTTA 7661 Query 160024 GTATTGCGTTTTCTAACAAGCGGTGGCTTCATTT 160057 | |||| ||||| || || | ||| | ||||| Sbjct 7662 GGGTTGCTTTTTCCAATAAATGTTGGTTACATTT 7695 Score = 138 bits (152), Expect = 1e-27 Identities = 186/259 (72%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 160053 CATTTCTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATT 160112 |||||||| ||||| ||||| || || | | | | |||| || |||| | | Sbjct 8874 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTGTGGATGAGTGCTCTTGGAGTAGTC 8933 Query 160113 GGCCTTGCTCTTAATCTTCGTGCTTACGATTTCGTAAGTCAAGAGATCAGAGCAGCAGAA 160172 || || || || || || ||||| || || ||||| ||| || ||| | ||||| ||| Sbjct 8934 GGTCTGGCGCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 8993 Query 160173 GATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAACGAAGGACTACGTGCA 160232 |||| ||||||||||| |||||||||||||| || || || || ||||| | ||||| Sbjct 8994 GATCTTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCT 9053 Query 160233 TGGTTGGCACCTGCTGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCT 160292 ||| |||| || ||||| || ||||||||| |||| |||| || || || | || Sbjct 9054 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAATCCCTGAGGAGGTTCTACCC 9113 Query 160293 AGAGGCAACGCCCTTTAAT 160311 | || ||||| ||||||| Sbjct 9114 CGTGGAAACGCTCTTTAAT 9132 >seq938 Length=1460269 Score = 105 bits (116), Expect = 7e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 158750 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTGTCGTGCTGGT 158809 |||||||| ||||| || || || || || | || | |||||||| | |||||| Sbjct 244833 TACATTCTTGACGCCGCGGAGGAGGCCGGTATCGACCTACCCTACTCTTGCAGGGCTGGT 244892 Query 158810 GCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG 158869 |||||||||||||||| || ||| |||| || ||| || ||| |||||| Sbjct 244893 TCTTGCTCTTCATGTGCTGGCAAAGTTGTGGAAGGGGGTGTGGACCAGTCAGATCAGAGC 244952 Query 158870 TTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACA 158929 ||| | || ||||| ||||||| | |||||||| ||||| ||||| || ||||| || Sbjct 244953 TTCCTTGATGATGAACAGATTGATGGTGGATTTGTCCTTACTTGTGTGGCTTATCCTTCA 245012 Query 158930 TCTGAT 158935 |||||| Sbjct 245013 TCTGAT 245018 Score = 105 bits (116), Expect = 7e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 158750 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTGTCGTGCTGGT 158809 |||||||| ||||| || || || || || | || | |||||||| | |||||| Sbjct 250364 TACATTCTTGACGCCGCGGAGGAGGCCGGTATCGACCTACCCTACTCTTGCAGGGCTGGT 250423 Query 158810 GCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG 158869 |||||||||||||||| || ||| |||| || ||| || ||| |||||| Sbjct 250424 TCTTGCTCTTCATGTGCTGGCAAAGTTGTGGAAGGGGGTGTGGACCAGTCAGATCAGAGC 250483 Query 158870 TTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACA 158929 ||| | || ||||| ||||||| | |||||||| ||||| ||||| || ||||| || Sbjct 250484 TTCCTTGATGATGAACAGATTGATGGTGGATTTGTCCTTACTTGTGTGGCTTATCCTTCA 250543 Query 158930 TCTGAT 158935 |||||| Sbjct 250544 TCTGAT 250549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548304838707360