Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq96 407 2e-108 >seq96 Length=556063 Score = 407 bits (450), Expect = 2e-108 Identities = 553/766 (72%), Gaps = 4/766 (1%) Strand=Plus/Plus Query 152359 TTTGATGTCCTGGATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGGTCTGGA 152418 |||||| | ||||||||||| | ||| |||||||| |||||||| ||||||||||| Sbjct 6932 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGC 6991 Query 152419 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 152478 || |||| ||||| ||| ||| | ||| | || |||||| || || || || || Sbjct 6992 CTATTTCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTCCACAGGTACAACCTTT 7051 Query 152479 GCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTT 152538 | || |||||||| || | || |||||||||||| |||| ||| |||||| | Sbjct 7052 GTAACTTCATGGTATACCCATGAATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTTTTA 7111 Query 152539 ACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGT 152598 || | |||||||| ||||| || || | | | || ||| | || | || |||||| Sbjct 7112 ACCGTCGCAGTTTCCACTCCGGCTAATAGTTTAGCACACTCTTTATTGTTACTATGGGGT 7171 Query 152599 CCTGAGGCTCAAGGGGA-TTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGT 152657 ||| | || ||||| || ||| || | ||| ||| | || || || ||| ||||||| Sbjct 7172 CCTAAAGCACAAGGAGACTTTACTC-GTTGGTGTCAATTAGGCGGTCTATGGACTTTTGT 7230 Query 152658 GGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCACG 152717 || || || || ||||||| ||||| ||||| ||| | || || |||||||| || || Sbjct 7231 TGCTCTACATGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 7290 Query 152718 -TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTG 152776 ||| || | | || || || ||||| || || |||||| ||| || | |||||||| Sbjct 7291 ATCTATTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTAGTCGAATTGTTGTTTTTG 7349 Query 152777 TTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCG 152836 || || || || || || || || ||||| | |||||||||| || || ||| | Sbjct 7350 TTTATGTATTCCTAATTTATCCGCTAGGTCAGTTTGGTTGGTTTTTTGCGCCCAGTTTTG 7409 Query 152837 GGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGA 152896 | || ||||| || || |||||| | ||||| | ||||| || || || |||||||||| Sbjct 7410 GTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 7469 Query 152897 ATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTC 152956 | || |||||||||||||| ||||| || | ||||| | || || | | ||| |||| Sbjct 7470 ACCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGTGCTATTC 7529 Query 152957 ATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAG 153016 |||||| ||| |||| |||||||| | | |||||||||| ||||| || ||| | Sbjct 7530 ATGGTGCTACTATAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 7589 Query 153017 CTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGT 153076 |||| || ||||||| ||||| || ||||| ||||| || |||| || || |||| Sbjct 7590 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCACTAATCGCTTTTGGT 7649 Query 153077 CCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTT 153122 |||| || ||| | |||||||| ||||||| | ||| | ||||| Sbjct 7650 CCCAAATCTTTAGGGTTGCTTTTTCCAATAAATGTTGGTTACATTT 7695 Score = 161 bits (178), Expect = 1e-34 Identities = 188/254 (74%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 153118 CATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATT 153177 |||||||||||| | |||||||| || | | | | |||| | || ||||| | | Sbjct 8874 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTGTGGATGAGTGCTCTTGGAGTAGTC 8933 Query 153178 GGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAA 153237 ||||| || || || || ||||| || || || || ||||| |||||| | || | ||| Sbjct 8934 GGTCTGGCGCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 8993 Query 153238 GATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCT 153297 |||| |||||||||||| ||||| || || ||||| || || || |||||| |||||||| Sbjct 8994 GATCTTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCT 9053 Query 153298 TGGTTGGCACCTGTTGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCA 153357 ||| |||| || || || |||||||| ||| | | ||||||| ||||| | || Sbjct 9054 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAATCCCTGAGGAGGTTCTACCC 9113 Query 153358 CGAGGCAACGCTCT 153371 || || |||||||| Sbjct 9114 CGTGGAAACGCTCT 9127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549552680398560