Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq486 102 1e-16 >seq486 Length=243247 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || || || || ||||| || || ||| | || || || | | Sbjct 19787 TGCAAATATTTGTCAAGACTTTGACTGGAAAGACTATCACTCTGGAGGTGGAGGGTTCAG 19728 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||| || || || ||| || ||||| || ||||| || |||| Sbjct 19727 ATACCATAGACAATGTGAAGGCAAAGATTCAAGACAAGGAAGGGATCCCACCTGACCAAC 19668 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || ||||||||||| || || | || ||| || || || |||||||||||| Sbjct 19667 AAAGGCTTATTTTTGCAGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCAGATTATAATA 19608 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || ||||| ||| | ||| | || | ||| |||| || || Sbjct 19607 TCCAGAAGGAATCTACTTTGCATCTTGTTCTTCGACTAAGGGGTGG 19562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786066674792160