Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq96 340 2e-88 seq938 105 7e-18 >seq96 Length=556063 Score = 340 bits (376), Expect = 2e-88 Identities = 538/766 (70%), Gaps = 4/766 (1%) Strand=Plus/Plus Query 158775 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 158834 ||||| || | || |||||| | |||| ||||| |||||||| || |||||||| Sbjct 6932 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGC 6991 Query 158835 CTTCTTCTTCTACCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTC 158894 || |||| | || ||| ||| | ||| | || |||||| || || || || || Sbjct 6992 CTATTTCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTCCACAGGTACAACCTTT 7051 Query 158895 GCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGGTGCAAACTTTCTT 158954 | || |||||||| |||| | | || | ||||||| | || || |||||| | Sbjct 7052 GTAACTTCATGGTATACCCATGAATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTTTTA 7111 Query 158955 ACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGT 159014 || | |||||||| ||||| ||| || | | | || ||| | || | || |||||| Sbjct 7112 ACCGTCGCAGTTTCCACTCCGGCTAATAGTTTAGCACACTCTTTATTGTTACTATGGGGT 7171 Query 159015 CCTGAGGCTCAAGGGGA-TTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGT 159073 ||| | || ||||| || ||| || | ||| ||| | || || || |||| |||||| Sbjct 7172 CCTAAAGCACAAGGAGACTTTACTC-GTTGGTGTCAATTAGGCGGTCTATGGACTTTTGT 7230 Query 159074 GGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACG 159133 || || || || || || | ||||| ||||| ||| | || || |||||||| || || Sbjct 7231 TGCTCTACATGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 7290 Query 159134 -TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG 159192 ||| || | | || || || ||||| || || |||||| ||| |||| |||||||| Sbjct 7291 ATCTATTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTAGTCGAATTGTTGTTTTTG 7349 Query 159193 TCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTG 159252 | || ||||| || || || || ||||||| |||||||||| || || |||| Sbjct 7350 TTTATGTATTCCTAATTTATCCGCTAGGTCAGTTTGGTTGGTTTTTTGCGCCCAGTTTTG 7409 Query 159253 GGGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAA 159312 | || || || ||||| | ||| | ||||| | |||||||| || ||||||||| | | Sbjct 7410 GTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 7469 Query 159313 ACCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTC 159372 |||| || |||||||||||||||||||| | | || | || || ||| |||||||| Sbjct 7470 ACCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGTGCTATTC 7529 Query 159373 ATGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGG 159432 |||| | || | |||||||| |||| || ||||| || ||||| || || | Sbjct 7530 ATGGTGCTACTATAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 7589 Query 159433 CGTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 159492 | ||| | ||||||||| || || |||||||| |||||||| | || ||||| |||| Sbjct 7590 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCACTAATCGCTTTTGGT 7649 Query 159493 CGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTT 159538 | || ||||| | |||| ||||| || || | ||| | ||||| Sbjct 7650 CCCAAATCTTTAGGGTTGCTTTTTCCAATAAATGTTGGTTACATTT 7695 Score = 141 bits (156), Expect = 1e-28 Identities = 182/251 (73%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 159534 CATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATT 159593 |||||||||||||| ||||| || || | | | | |||| | |||| | | Sbjct 8874 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTGTGGATGAGTGCTCTTGGAGTAGTC 8933 Query 159594 GGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAA 159653 ||||| || || || || ||||| || || ||||| ||| || ||| | ||||| ||| Sbjct 8934 GGTCTGGCGCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 8993 Query 159654 GATCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCT 159713 |||| |||||||| || ||||||||||| || ||||| | |||||||| | |||||| Sbjct 8994 GATCTTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCT 9053 Query 159714 TGGTTGGCACCTGCTGATCAACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCA 159773 ||| |||| || ||||| || ||||||||| | || |||| || || |||||||| Sbjct 9054 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAATCCCTGAGGAGGTTCTACCC 9113 Query 159774 AGAGGTAACGC 159784 | || ||||| Sbjct 9114 CGTGGAAACGC 9124 >seq938 Length=1460269 Score = 105 bits (116), Expect = 7e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 158222 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAACTACTCTTGTCGTGCTGGT 158281 |||||||| ||||| || || || || || | || | ||||||||| | |||||| Sbjct 244833 TACATTCTTGACGCCGCGGAGGAGGCCGGTATCGACCTACCCTACTCTTGCAGGGCTGGT 244892 Query 158282 GCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG 158341 |||||||||||||||| || ||| |||| || ||| || ||| |||||| Sbjct 244893 TCTTGCTCTTCATGTGCTGGCAAAGTTGTGGAAGGGGGTGTGGACCAGTCAGATCAGAGC 244952 Query 158342 TTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACA 158401 ||||| || ||||| || || | | |||||||| ||||| ||||| || ||||| || Sbjct 244953 TTCCTTGATGATGAACAGATTGATGGTGGATTTGTCCTTACTTGTGTGGCTTATCCTTCA 245012 Query 158402 TCTGAT 158407 |||||| Sbjct 245013 TCTGAT 245018 Score = 105 bits (116), Expect = 7e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 158222 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAACTACTCTTGTCGTGCTGGT 158281 |||||||| ||||| || || || || || | || | ||||||||| | |||||| Sbjct 250364 TACATTCTTGACGCCGCGGAGGAGGCCGGTATCGACCTACCCTACTCTTGCAGGGCTGGT 250423 Query 158282 GCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG 158341 |||||||||||||||| || ||| |||| || ||| || ||| |||||| Sbjct 250424 TCTTGCTCTTCATGTGCTGGCAAAGTTGTGGAAGGGGGTGTGGACCAGTCAGATCAGAGC 250483 Query 158342 TTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACA 158401 ||||| || ||||| || || | | |||||||| ||||| ||||| || ||||| || Sbjct 250484 TTCCTTGATGATGAACAGATTGATGGTGGATTTGTCCTTACTTGTGTGGCTTATCCTTCA 250543 Query 158402 TCTGAT 158407 |||||| Sbjct 250544 TCTGAT 250549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545204432043840