Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq7758 96.9 8e-15 seq853 96.9 8e-15 >seq7758 Length=1097 Score = 96.9 bits (106), Expect = 8e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 || || |||||||| || ||||| |||||||| || || ||| || || || |||||| Sbjct 557 GTGGCCTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGGAGTTTTTGCGCGATATTTTGG 498 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 || |||||||| || || ||||||||||| | || || || | || |||||| ||||| Sbjct 497 CTAAAGAAGCGCGGGTTAATGCCTGGACTGACGTTCTCAAACGAGTTGATCTCGCGAGAT 438 Query 131984 GAAGCATTGCA 131994 || | ||||| Sbjct 437 GAGGGTTTGCA 427 >seq853 Length=703183 Score = 96.9 bits (106), Expect = 8e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 || || |||||||| || ||||| |||||||| || || ||| || || || |||||| Sbjct 573693 GTGGCCTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGGAGTTTTTGCGCGATATTTTGG 573634 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 || |||||||| || || ||||||||||| | || || || | || |||||| ||||| Sbjct 573633 CTAAAGAAGCGCGGGTTAATGCCTGGACTGACGTTCTCAAACGAGTTGATCTCGCGAGAT 573574 Query 131984 GAAGCATTGCA 131994 || | ||||| Sbjct 573573 GAGGGTTTGCA 573563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186658489116228