Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq7758 86.0 6e-12 seq853 86.0 6e-12 seq736 84.2 2e-11 >seq7758 Length=1097 Score = 86.0 bits (94), Expect = 6e-12 Identities = 162/238 (68%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 46744 ATGCGTTCGAGCACGTGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCG 46803 ||||| |||| | | || ||||| || ||||||||||||||| | ||||||| Sbjct 646 ATGCGATCGATACCATTCCCTGCGTCACGAAGAAGGCCCAGTGGGCCCTACGCTGGATCG 587 Query 46804 AGAGCGAGACCGCCACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGt 46863 | || | | || | || ||||| || ||||| || || || ||||| | | Sbjct 586 ACGGCT---CAGAATCGTTTGCGGAGCGGATCGTGGCCTTTGCTTGCGTGGAAGGGATAT 530 Query 46864 ttttttCGGGCAGTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCC 46923 | || ||||| |||||| ||| || |||| | || | || ||||||| || | Sbjct 529 TCTTCTCGGGGAGTTTTTGCGCGATATTTTGGCTAAAGAAGCGCGGGTTAATGCCTGGAC 470 Query 46924 TGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTG 46981 |||||||| ||||||||||||||||| || || || | ||| ||||| ||||| Sbjct 469 TGACGTTCTCAAACGAGTTGATCTCGCGAGATGAGGGTTTGCACTGCGACTTCGCGTG 412 >seq853 Length=703183 Score = 86.0 bits (94), Expect = 6e-12 Identities = 162/238 (68%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 46744 ATGCGTTCGAGCACGTGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCG 46803 ||||| |||| | | || ||||| || ||||||||||||||| | ||||||| Sbjct 573782 ATGCGATCGATACCATTCCCTGCGTCACGAAGAAGGCCCAGTGGGCCCTACGCTGGATCG 573723 Query 46804 AGAGCGAGACCGCCACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGt 46863 | || | | || | || ||||| || ||||| || || || ||||| | | Sbjct 573722 ACGGCT---CAGAATCGTTTGCGGAGCGGATCGTGGCCTTTGCTTGCGTGGAAGGGATAT 573666 Query 46864 ttttttCGGGCAGTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCC 46923 | || ||||| |||||| ||| || |||| | || | || ||||||| || | Sbjct 573665 TCTTCTCGGGGAGTTTTTGCGCGATATTTTGGCTAAAGAAGCGCGGGTTAATGCCTGGAC 573606 Query 46924 TGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTG 46981 |||||||| ||||||||||||||||| || || || | ||| ||||| ||||| Sbjct 573605 TGACGTTCTCAAACGAGTTGATCTCGCGAGATGAGGGTTTGCACTGCGACTTCGCGTG 573548 >seq736 Length=481145 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | |||||||| | | ||||||| || || ||||||||||| | ||| Sbjct 406939 ACGCAGACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCTGCGAGGGT 406998 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| || || ||||| || |||| |||| |||||||| ||||||||||| ||||| Sbjct 406999 ACGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGAGGGATGCC 407058 Query 132022 TTCTTTATC 132030 || || || Sbjct 407059 CTCCTTGTC 407067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476550741869280