Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq853 266 5e-65 seq7758 262 6e-64 seq639 107 3e-17 >seq853 Length=703183 Score = 266 bits (294), Expect = 5e-65 Identities = 393/547 (72%), Gaps = 16/547 (3%) Strand=Plus/Minus Query 1455734 AACCCGAACCGCTT-TGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCA 1455792 |||||| ||||||| ||| ||||||| |||| |||| | || ||||| |||||| | Sbjct 574140 AACCCGGACCGCTTCTGTA-TGTTCCCGATCCAATACCCGGAAATCTGGGAGATGTAC-A 574083 Query 1455793 AAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGAC--ACGGT 1455850 | ||||||||||||||||| ||||||||||||||||| || | || ||| ||| Sbjct 574082 AGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGTTGATTTATGCCAGGACCTACG-- 574025 Query 1455851 CCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTT 1455910 |||||||| || | || |||| || ||||||| ||||| |||||||| || Sbjct 574024 CCACTGGGAACTTCTAGCCCCCGGCGAGAAGCACTTCATCACCCACGTGCTCGCCTTCTT 573965 Query 1455911 TCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCC 1455970 ||| ||| || ||||| || ||||| || ||||| | || ||||| || |||| Sbjct 573964 -CGCTGCCTCTGACGGCATTGTTTTGGAGAATCTCGCCGGAAGGTTCATGAAGGAAGTCC 573906 Query 1455971 AATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTG 1456030 | | | ||||| || || ||||| ||||||||||||||||| ||||||||||| | Sbjct 573905 AGGTCTCCGAGGCTCGAGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCG 573846 Query 1456031 AAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCT 1456090 | | ||| ||||| | || |||||| |||||||| | | ||||||| || || | Sbjct 573845 AGATGTACAGCCTCCTCCTGGAGACCTACATCAAGGACTCAGACGAGAAGAACAGGCTTT 573786 Query 1456091 TTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGA 1456150 ||| || ||||| || | || | || | ||| |||||| | ||||| | |||| Sbjct 573785 TTCATGCGATCGATACCATTCCCTGCGTCACGAAGAAGGCCCAGTGGGCCCTACGCTGGA 573726 Query 1456151 TCAACAAGGAGGGCCTCGACAC-TTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGG 1456208 || || ||| || | ||||| |||||| |||| | |||||| |||| || | Sbjct 573725 TC------GACGGCTCAGAATCGTTTGCGGAGCGGATCGTGGCCTTTGCTTGCGTGGAAG 573672 Query 1456209 GCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGC 1456268 | || || |||||||| ||||| ||||| || |||||||| ||||||||||| | |||| Sbjct 573671 GGATATTCTTCTCGGGGAGTTTTTGCGCGATATTTTGGCTAAAGAAGCGCGGGTTAATGC 573612 Query 1456269 CCGGTCT 1456275 | || || Sbjct 573611 CTGGACT 573605 >seq7758 Length=1097 Score = 262 bits (290), Expect = 6e-64 Identities = 392/547 (72%), Gaps = 16/547 (3%) Strand=Plus/Minus Query 1455734 AACCCGAACCGCTT-TGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCA 1455792 |||||| |||| || ||| ||||||| |||| |||| | || ||||| |||||| | Sbjct 1004 AACCCGGACCGTTTCTGTA-TGTTCCCGATCCAATACCCGGAAATCTGGGAGATGTAC-A 947 Query 1455793 AAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGAC--ACGGT 1455850 | ||||||||||||||||| ||||||||||||||||| || | || ||| ||| Sbjct 946 AGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGTTGATTTATGCCAGGACCTACG-- 889 Query 1455851 CCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTT 1455910 |||||||| || | || |||| || ||||||| ||||| |||||||| || Sbjct 888 CCACTGGGAACTTCTAGCCCCCGGCGAGAAGCACTTCATCACCCACGTGCTCGCCTTCTT 829 Query 1455911 TCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCC 1455970 ||| ||| || ||||| || ||||| || ||||| | || ||||| || |||| Sbjct 828 -CGCTGCCTCTGACGGCATTGTTTTGGAGAATCTCGCCGGAAGGTTCATGAAGGAAGTCC 770 Query 1455971 AATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTG 1456030 | | | ||||| || || ||||| ||||||||||||||||| ||||||||||| | Sbjct 769 AGGTCTCCGAGGCTCGAGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCG 710 Query 1456031 AAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCT 1456090 | | ||| ||||| | || |||||| |||||||| | | ||||||| || || | Sbjct 709 AGATGTACAGCCTCCTCCTGGAGACCTACATCAAGGACTCAGACGAGAAGAACAGGCTTT 650 Query 1456091 TTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGA 1456150 ||| || ||||| || | || | || | ||| |||||| | ||||| | |||| Sbjct 649 TTCATGCGATCGATACCATTCCCTGCGTCACGAAGAAGGCCCAGTGGGCCCTACGCTGGA 590 Query 1456151 TCAACAAGGAGGGCCTCGACAC-TTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGG 1456208 || || ||| || | ||||| |||||| |||| | |||||| |||| || | Sbjct 589 TC------GACGGCTCAGAATCGTTTGCGGAGCGGATCGTGGCCTTTGCTTGCGTGGAAG 536 Query 1456209 GCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGC 1456268 | || || |||||||| ||||| ||||| || |||||||| ||||||||||| | |||| Sbjct 535 GGATATTCTTCTCGGGGAGTTTTTGCGCGATATTTTGGCTAAAGAAGCGCGGGTTAATGC 476 Query 1456269 CCGGTCT 1456275 | || || Sbjct 475 CTGGACT 469 >seq639 Length=266865 Score = 107 bits (118), Expect = 3e-17 Identities = 167/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||| || ||||| ||||||||| | || || ||| || | |||| || Sbjct 79059 ATCTTCAAGGTCCTGAAGCAAGTGCACCCCGATATCG---GG--ATC-TCGAGCAAGGCC 79112 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG-GCACCGAGGCCGG 725029 ||| |||||||||| || |||||||||| |||| ||| ||| |||||| Sbjct 79113 ATGGGGATCATGAACAGCTTCATCAACGACATATTCGAGAAGCTCGCGCAG-GAGGCCTC 79171 Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 || |||| |||| ||||||| ||| || |||| |||||||||||||| || Sbjct 79172 GCGATTGGCTCGCTACAACAAGAAGCCCACCATTACGTCGCGGGAGATCCAGACCGCGGT 79231 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||| || ||| ||| || || |||| |||||||| ||||||||||||| Sbjct 79232 CAGGCTGGTCCTGCCCGGTGAGCTCGCCAAACACGCCGTTTCCGAGGGCACCA 79284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176832406747976