Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq96 320 2e-82 >seq96 Length=556063 Score = 320 bits (354), Expect = 2e-82 Identities = 529/758 (70%), Gaps = 8/758 (1%) Strand=Plus/Plus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| || ||||| ||||| ||||||||||| || | || Sbjct 6942 TGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGCCTATTTCTCT 7001 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||| ||| | || | || |||||| || || ||| | ||||| || | Sbjct 7002 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTCCACAGGTACAACCTTTGTAACTTCAT 7061 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTG 182550 |||| ||||| | | || ||||||| | ||||| ||||||| | || | || | Sbjct 7062 GGTATACCCATGAATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTTTTAACCGTCGCAG 7121 Query 182551 TCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 182610 | || || || ||| || | | | || ||| | | |||| ||||||||| | | | Sbjct 7122 TTTCCACTCCGGCTAATAGTTTAGCACACTCTTTATTGTTACTATGGGGTCCTAAAGCAC 7181 Query 182611 -AGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 182669 ||| || ||| | || ||||| ||| | || || || |||| ||| || ||||| || Sbjct 7182 AAGGAGACTTTAC-TCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTTGCTCTACAT 7240 Query 182670 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGCCTGATTGGA 182729 || || |||| || || ||||| ||| | | ||||||||||||||||| ||| | Sbjct 7241 GGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTATTCAA 7300 Query 182730 ATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTC 182789 | ||||||| ||||| || || || ||| ||| |||| ||| || || ||| ||| Sbjct 7301 TTGCGACCTTATAATGCAATCGCATTCTCTAGTCGAATTGTTGTTTTTGTTTATGTATTC 7360 Query 182790 CTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCG 182849 || || ||||| | || |||| ||||||||| ||||| |||||||| || || Sbjct 7361 CTAATTTATCCGCTAGGTCAGTTTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCT 7420 Query 182850 ATCTTCAGGT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTC 182906 || || | | |||| || |||| ||||||| || || |||||| | ||||| || Sbjct 7421 ATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATTT 7477 Query 182907 CATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTC 182966 |||||||||||||||||||| | |||| | || ||| | ||||||| ||||||| Sbjct 7478 CATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGTGCTATTCATGGTGCT 7537 Query 182967 ACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGAT 183026 || |||| ||||| || | ||||||||| || ||||| ||||| || || | Sbjct 7538 ACTATAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAAC 7597 Query 183027 TCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATC 183086 | ||||| | || || || ||||| ||||| || | ||||| |||||||| |||||| Sbjct 7598 CCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCACTAATCGCTTTTGGTCCCAAATC 7657 Query 183087 TTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTT 183124 || ||||||| ||| |||||| ||||||| || || Sbjct 7658 TTTAGGGTTGCTTTTTCCAATAAATGTTGGTTACATTT 7695 Score = 134 bits (148), Expect = 2e-26 Identities = 182/254 (72%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 183120 CACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATT 183179 || ||||||||||| ||||| || || | | | | ||| | | || |||| | | Sbjct 8874 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTGTGGATGAGTGCTCTTGGAGTAGTC 8933 Query 183180 GGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAA 183239 || || || || || || ||||| ||||| || || ||| || || | ||||| ||| Sbjct 8934 GGTCTGGCGCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 8993 Query 183240 GATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGCT 183299 |||| ||| || ||||| |||||||| || || || || | |||||||| | |||||| Sbjct 8994 GATCTTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCT 9053 Query 183300 TGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACCT 183359 ||| |||| || ||||| || ||||||||| | || ||||||| || |||||||| Sbjct 9054 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAATCCCTGAGGAGGTTCTACCC 9113 Query 183360 AGAGGTAACGCACT 183373 | || ||||| || Sbjct 9114 CGTGGAAACGCTCT 9127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614539635757440