Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq96 293 3e-74 >seq96 Length=556063 Score = 293 bits (324), Expect = 3e-74 Identities = 522/762 (69%), Gaps = 0/762 (0%) Strand=Plus/Plus Query 175853 TGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATT 175912 ||||||| |||| |||||| | | || || | ||| | ||| | || |||||||| | Sbjct 6934 TGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGCCT 6993 Query 175913 ACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGT 175972 | | || |||| ||| ||| | || | || || ||| || || ||||| ||||| Sbjct 6994 ATTTCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTCCACAGGTACAACCTTTGT 7053 Query 175973 CACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAACTTTCTCAC 176032 || ||||| ||||||| | || ||||||| | || || ||||||| | || Sbjct 7054 AACTTCATGGTATACCCATGAATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTTTTAAC 7113 Query 176033 AGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 176092 | || || || ||||| ||| || | | | || ||| | | |||| |||||||| Sbjct 7114 CGTCGCAGTTTCCACTCCGGCTAATAGTTTAGCACACTCTTTATTGTTACTATGGGGTCC 7173 Query 176093 TGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGC 176152 | || | || || ||||| || ||| ||| | || || || ||| | |||||||| Sbjct 7174 TAAAGCACAAGGAGACTTTACTCGTTGGTGTCAATTAGGCGGTCTATGGACTTTTGTTGC 7233 Query 176153 TCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACT 176212 ||| || || || |||| || || || || ||| | ||||| |||||||| || || Sbjct 7234 TCTACATGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATC 7293 Query 176213 CATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAG 176272 ||| | || || || || || || |||||| | ||| || | ||| ||||| Sbjct 7294 TATTCAATTGCGACCTTATAATGCAATCGCATTCTCTAGTCGAATTGTTGTTTTTGTTTA 7353 Query 176273 TGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGT 176332 ||| || || | || || |||||||| | | ||||| ||||| ||| |||||||| Sbjct 7354 TGTATTCCTAATTTATCCGCTAGGTCAGTTTGGTTGGTTTTTTGCGCCCAGTTTTGGTGT 7413 Query 176333 GGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCC 176392 ||||| || ||| ||||| | | ||| | || || || || || |||||| ||||||| Sbjct 7414 AGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCC 7473 Query 176393 CTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGG 176452 || |||||||||||||||||||| | | || | || || ||| ||| || ||||| Sbjct 7474 ATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGTGCTATTCATGG 7533 Query 176453 CGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTT 176512 | |||| | |||||||| ||| ||||||||| || || || ||| ||| || Sbjct 7534 TGCTACTATAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTT 7593 Query 176513 CGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCA 176572 | | || || | ||||| || ||||| ||||| || | || ||||| ||||| || Sbjct 7594 TAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCACTAATCGCTTTTGGTCCCA 7653 Query 176573 AATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTT 176614 |||||| ||||||| ||| ||||| ||||| | || || Sbjct 7654 AATCTTTAGGGTTGCTTTTTCCAATAAATGTTGGTTACATTT 7695 Score = 93.3 bits (102), Expect = 6e-14 Identities = 171/251 (68%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 176610 CACTTCTTTATGTTGTTTGTCCCTGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATT 176669 || ||||||||||| ||||| || || | | | | ||| | | |||| | | Sbjct 8874 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTGTGGATGAGTGCTCTTGGAGTAGTC 8933 Query 176670 GGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAA 176729 || || || || || || ||||| ||||| || || || || || | ||||| ||| Sbjct 8934 GGTCTGGCGCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 8993 Query 176730 GATCCTGAGTTTGAAACTTTCTACACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCA 176789 |||| ||| ||||| ||||||||||| || || || || | || ||||| | | || Sbjct 8994 GATCTTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCT 9053 Query 176790 TGGATGGCACCTGTGGATCAACCACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCT 176849 |||||||| || ||||| || ||||| || || |||| || || |||||||| Sbjct 9054 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAATCCCTGAGGAGGTTCTACCC 9113 Query 176850 AGAGGTAACGC 176860 | || ||||| Sbjct 9114 CGTGGAAACGC 9124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729837008430240