Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq96 320 2e-82 seq211 84.2 3e-11 >seq96 Length=556063 Score = 320 bits (354), Expect = 2e-82 Identities = 516/739 (70%), Gaps = 2/739 (0%) Strand=Plus/Plus Query 180051 GACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTCTTCCCACTGCTTATCTTGCC 180110 ||||| ||||| ||||| || |||||||| ||| | || |||| ||| ||| | || Sbjct 6962 GACCGTTTTGTTTTTGTAGGTTGGTCTGGCCTATTTCTCTTTCCTTGTGCCTATTTCGCT 7021 Query 180111 ATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCT 180170 | || |||||| || || ||| | ||||| || ||||| ||||| | | || Sbjct 7022 TTAGGGGGTTGGTCCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGAATTAGCA 7081 Query 180171 TCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCT 180230 ||||||| | ||||| ||||||| | || | || || || || || ||| | | Sbjct 7082 AGTTCCTATTTGGAAGGCTGTAACTTTTTAACCGTCGCAGTTTCCACTCCGGCTAATAGT 7141 Query 180231 ATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGG-GAATTTCCAACGGTG 180289 | | || ||| | | |||| ||||||||| | | || || || ||| | || || Sbjct 7142 TTAGCACACTCTTTATTGTTACTATGGGGTCCTAAAGCACAAGGAGACTTTACT-CGTTG 7200 Query 180290 GTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGG 180349 ||| ||| | || || || |||| ||| || ||||| || || || |||| ||||| || Sbjct 7201 GTGTCAATTAGGCGGTCTATGGACTTTTGTTGCTCTACATGGCGCTTTCGGACTAATAGG 7260 Query 180350 ATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAATGCTAT 180409 |||||| |||| || |||||||| || || |||| | || ||||| ||||| || Sbjct 7261 TTTTATGTTACGTCAATTTGAACTTGCTCGATCTATTCAATTGCGACCTTATAATGCAAT 7320 Query 180410 TGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCA 180469 ||||||||| ||| || | ||| ||||| ||||| || || || || || ||||| Sbjct 7321 CGCATTCTCTAGTCGAATTGTTGTTTTTGTTTATGTATTCCTAATTTATCCGCTAGGTCA 7380 Query 180470 GTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTT 180529 || ||||||| ||||| ||| |||||| |||||||| || ||| ||||| | ||||| Sbjct 7381 GTTTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTT 7440 Query 180530 TCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTAT 180589 | | || || || || || ||||| | ||||| || |||||||||||||||||||| | Sbjct 7441 TTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTGGGGT 7500 Query 180590 ACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACTGTGGAGAACACACTGTATGA 180649 | || | || || ||| || || ||||| | ||| | || || || | | ||| Sbjct 7501 GTTGGGCGCTGCTCTGTTATGTGCTATTCATGGTGCTACTATAGAAAATACTTTATTTGA 7560 Query 180650 AGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTA 180709 |||||| || ||||| || || || ||| | |||| |||| || |||||||| Sbjct 7561 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTA 7620 Query 180710 CTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAA 180769 || |||||||| | || ||||| ||||| || ||||| | |||| ||||| || || Sbjct 7621 TTCAATGGTCACCACTAATCGCTTTTGGTCCCAAATCTTTAGGGTTGCTTTTTCCAATAA 7680 Query 180770 GCGGTGGCTTCATTTTTTC 180788 | ||| | |||||| || Sbjct 7681 ATGTTGGTTACATTTTGTC 7699 Score = 138 bits (152), Expect = 1e-27 Identities = 181/251 (72%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 180780 CATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATT 180839 ||||| || ||||| ||||| || || | | | | |||| || |||| | | Sbjct 8874 CATTTCTTTATGTTATTTGTACCAGTAACCGTTTTGTGGATGAGTGCTCTTGGAGTAGTC 8933 Query 180840 GGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAA 180899 ||||| || || ||||| ||||| || || ||||| ||| || ||| | ||||| ||| Sbjct 8934 GGTCTGGCGCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAA 8993 Query 180900 GATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCA 180959 |||| ||| || ||||| ||||||||||| || || || || |||||||| | ||||| Sbjct 8994 GATCTTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAATGAAGGTATTCGTGCT 9053 Query 180960 TGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCA 181019 ||| |||| || ||||| || || |||||| | || ||||||| || |||||||| Sbjct 9054 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATAATCCCTGAGGAGGTTCTACCC 9113 Query 181020 AGAGGTAACGC 181030 | || ||||| Sbjct 9114 CGTGGAAACGC 9124 >seq211 Length=154590 Score = 84.2 bits (92), Expect = 3e-11 Identities = 92/121 (76%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 180401 CAATGCTA-TTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACC 180459 |||||| | |||||||||| |||| || ||||| ||||| ||||| || || || | Sbjct 29659 CAATGCGAATTGCATTCTCCGGTCTAATTGCTGTTTTTGTTTCTGTATTCCTAATTTATC 29718 Query 180460 CACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGAT 180519 | || |||||||| |||||| || || ||| |||||| |||||||| || ||| ||| Sbjct 29719 CGCTAGGTCAGTCTGCTTGGTTTTTGGCGCCCAGTTTTGGTGTAGCAGCTATATTTCGAT 29778 Query 180520 T 180520 | Sbjct 29779 T 29779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610252179690240