Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq486 82.4 6e-11 >seq486 Length=243247 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 |||||||| ||||| || || ||||| ||||| |||| ||| || ||| || | || Sbjct 19586 TGCAAAGTAGATTCCTTCTGGATATTATAATCTGCCAAAGTCCTGCCATCCTCAAGCTGC 19645 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 || || ||| | ||||||||||||||||| || | ||||| ||||| ||| ||| Sbjct 19646 TTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGTGGGATCCCTTCCTTGTCTTGAATCTTT 19705 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTC 101215 ||||||| | | | || |||| | || | || ||||| || || ||| Sbjct 19706 GCCTTCACATTGTCTATGGTATCTGAACCCTCCACCTCCAGAGTGATAGTCTTTCCAGTC 19765 Query 101216 AATGTTTTAATAAAAATTTGCAT 101238 || || || | ||| |||||||| Sbjct 19766 AAAGTCTTGACAAATATTTGCAT 19788 Score = 82.4 bits (90), Expect = 6e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 101035 GTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTG 101094 ||||||||| ||||| || || || ||||||||||||| ||| | ||||||||| || Sbjct 20072 GTGCAAAGTAGATTCCTTCTGGATGTTGTAATCGGCCAAAGTCCTACCATCTTCCAACTG 20131 Query 101095 TTTGCCCGCATATATAAGCCTTTGTTGGTC 101124 || || ||| |||||||||| || ||||| Sbjct 20132 CTTTCCAGCAAATATAAGCCTCTGCTGGTC 20161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409610133664332