Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20avium_20[refseq_20GCF_5F002207925.1_202017-06-12] 10,148 sequences; 272,361,615 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq7758 147 2e-30 seq853 147 2e-30 >seq7758 Length=1097 Score = 147 bits (162), Expect = 2e-30 Identities = 380/576 (66%), Gaps = 5/576 (1%) Strand=Plus/Plus Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGT 4603 || ||||| || || || |||||||| || |||| || | |||| ||||| || ||||| Sbjct 409 AAGCACGCGAAGTCGCAGTGCAAACCCTCATCTC-GCGAGATCAACTCGTTTGAGAACGT 467 Query 4604 TAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAA 4663 | ||| |||||||| || | ||| || ||||||||||| ||| ||| ||| || || Sbjct 468 CAGTCCAGGCATTAACCCGCGCTTCTTTAGCCAAAATATCGCGCAAAAACTCCCCGAGAA 527 Query 4664 GAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTC 4723 |||||| ||||| ||| ||||| || || | || | | ||||| || | | Sbjct 528 GAATATCCCTTCCACGCAAGCAAAGGCCACGATCCGCTCCGCAAACGA---TTCTGAGCC 584 Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783 | ||||| || ||||| | || || ||| | ||||| ||||| || | || || Sbjct 585 GTCGATCCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGATCGC 644 Query 4784 GTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 | ||| | | | || || || ||| | || || || || | || ||||| || Sbjct 645 ATGAAAAAGCCTGTTCTTCTCGTCTGAGTCCTTGATGTAGGTCTCCAGGAGGAGGCTGTA 704 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 ||| || || || || || || || || ||||| || ||||| ||| || ||| || | Sbjct 705 CATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCTCGAGCCTCGGA 764 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 || || ||||| || || ||| | | | || || || || |||||| ||| Sbjct 765 GACCTGGACTTCCTTCATGAACCTTCCGGCGAGATTCTCCAAAACAATGCCGTCAGAGGC 824 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCA 5023 || || || || | || || | || |||| || ||| | || || || ||| Sbjct 825 AGCGAAGAAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCGGGGGCTAGAAGTTCCCA 884 Query 5024 GTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTT 5083 |||| | | || | ||||||||| || || | ||||| || || || || || || Sbjct 885 GTGGCGTAGGTCCTGGCATAAATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTT 944 Query 5084 TTTGTACATAGACCAAATATCAGGATACTGAATCGG 5119 |||||||| ||| || || || || || ||||| Sbjct 945 CTTGTACATCTCCCAGATTTCCGGGTATTGGATCGG 980 >seq853 Length=703183 Score = 147 bits (162), Expect = 2e-30 Identities = 380/576 (66%), Gaps = 5/576 (1%) Strand=Plus/Plus Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGT 4603 || ||||| || || || |||||||| || |||| || | |||| ||||| || ||||| Sbjct 573545 AAGCACGCGAAGTCGCAGTGCAAACCCTCATCTC-GCGAGATCAACTCGTTTGAGAACGT 573603 Query 4604 TAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAA 4663 | ||| |||||||| || | ||| || ||||||||||| ||| ||| ||| || || Sbjct 573604 CAGTCCAGGCATTAACCCGCGCTTCTTTAGCCAAAATATCGCGCAAAAACTCCCCGAGAA 573663 Query 4664 GAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTC 4723 |||||| ||||| ||| ||||| || || | || | | ||||| || | | Sbjct 573664 GAATATCCCTTCCACGCAAGCAAAGGCCACGATCCGCTCCGCAAACGA---TTCTGAGCC 573720 Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783 | ||||| || ||||| | || || ||| | ||||| ||||| || | || || Sbjct 573721 GTCGATCCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGATCGC 573780 Query 4784 GTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 | ||| | | | || || || ||| | || || || || | || ||||| || Sbjct 573781 ATGAAAAAGCCTGTTCTTCTCGTCTGAGTCCTTGATGTAGGTCTCCAGGAGGAGGCTGTA 573840 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 ||| || || || || || || || || ||||| || ||||| ||| || ||| || | Sbjct 573841 CATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCTCGAGCCTCGGA 573900 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 || || ||||| || || ||| | | | || || || || |||||| ||| Sbjct 573901 GACCTGGACTTCCTTCATGAACCTTCCGGCGAGATTCTCCAAAACAATGCCGTCAGAGGC 573960 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCA 5023 || || || || | || || | || |||| || ||| | || || || ||| Sbjct 573961 AGCGAAGAAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCGGGGGCTAGAAGTTCCCA 574020 Query 5024 GTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTT 5083 |||| | | || | ||||||||| || || | ||||| || || || || || || Sbjct 574021 GTGGCGTAGGTCCTGGCATAAATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTT 574080 Query 5084 TTTGTACATAGACCAAATATCAGGATACTGAATCGG 5119 |||||||| ||| || || || || || ||||| Sbjct 574081 CTTGTACATCTCCCAGATTTCCGGGTATTGGATCGG 574116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426996783039284