Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7 105 1e-17 seq3 102 2e-16 seq1 102 2e-16 seq4 100 6e-16 seq2 100 6e-16 seq14 98.7 2e-15 seq5 95.1 3e-14 >seq7 Length=17044513 Score = 105 bits (116), Expect = 1e-17 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 165702 AAACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGG 165761 ||||| |||||||||||||||||| |||||||||| || || |||| || |||||||||| Sbjct 6638005 AAACG-TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGG 6637947 Query 165762 GTTCGAGCCCCACGATGGGC 165781 |||||||||||||| ||||| Sbjct 6637946 GTTCGAGCCCCACGGTGGGC 6637927 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 4258664 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4258605 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4258604 CCCACGGTGGGC 4258593 >seq3 Length=24358521 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 23892200 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 23892259 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 23892260 GCCCCACGGTGGGC 23892273 >seq1 Length=26753024 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 5558679 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 5558738 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 5558739 GCCCCACGGTGGGC 5558752 >seq4 Length=23934096 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 23118108 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 23118049 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 23118048 CCCCACGGTGGGC 23118036 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 4108451 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4108510 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4108511 CCCACGGTGGGC 4108522 >seq2 Length=42086771 Score = 100 bits (110), Expect = 6e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || |||||||||||||||| |||||||||| || || |||| || ||||||||||||||| Sbjct 22451707 CTGGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 22451766 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 22451767 AGCCCCACGGTGGGC 22451781 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 13555568 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 13555509 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 13555508 CCCACGGTGGGC 13555497 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 36330811 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 36330870 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 36330871 CCCACGGTGGGC 36330882 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 38231491 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 38231550 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 38231551 CCCACGGTGGGC 38231562 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 38244351 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 38244410 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 38244411 CCCACGGTGGGC 38244422 Score = 95.1 bits (104), Expect = 3e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || |||||||||||||||| |||||||||| || || |||| || ||||||||||||||| Sbjct 22385853 CTGGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 22385912 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| || || Sbjct 22385913 AGCCCCACGGTGAGC 22385927 >seq14 Length=818213 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 688165 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 688106 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 688105 CCCACGGTGGGC 688094 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 688295 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 688354 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 688355 CCCACGGTGGGC 688366 >seq5 Length=26133890 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 20610924 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 20610983 Query 165770 CCCACGATGGGC 165781 |||||| |||| Sbjct 20610984 CCCACGGGGGGC 20610995 Score = 84.2 bits (92), Expect = 5e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 165713 CGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 |||||| ||||| ||||||||||| || || ||||||| ||||||||||||| ||||||| Sbjct 16531790 CGTCTAACTCAGGCGGTAGAGCGCAAGGCTCTTAATCTTGTGGTCGTGGGTTTGAGCCCC 16531849 Query 165773 ACGATGGGC 165781 | | ||||| Sbjct 16531850 ATGGTGGGC 16531858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057713350287320