Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 1e-13 >seq6 Length=21292200 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || || ||||| || ||| || || || |||||||||||||| || || ||||| || Sbjct 11371869 CAGTTCTACGTAGCCAATGGAGAGTTATCATGTCAAATGTATCAGCGTTCTGCTGACATC 11371810 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || |||||||| || || ||||||||| ||||| || || || | |||||||| ||| Sbjct 11371809 GGCCTGGGTGTGCCATTTAATATTGCATCATATGCTCTTCTGACATGCATGATTGCTCAT 11371750 Query 20551 GTT 20553 ||| Sbjct 11371749 GTT 11371747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399144281690980