Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 6e-12 >seq2 Length=42086771 Score = 86.0 bits (94), Expect = 6e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 ||| || ||||||||||| |||||||||||||| ||||| || ||||| ||||| || Sbjct 30383539 ACAAGCGAAATCACAATGGAGGCCCTCATCTCTGGAGATAAGCTCATTTGAGAATGTCAA 30383598 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 14302 |||||||| || || | ||||| | ||| ||||| ||| Sbjct 30383599 ACCTGGCATTAAGCCCCTCTTTTTAAGCCAGAATATGGCA 30383638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482296376631520