Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 1e-13 >seq3 Length=24358521 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||||| || || | |||| |||||| ||||| || ||||| ||||| || || || Sbjct 8722923 TCCTCCCCTCAGCCTCAAAACCAAGTGAAGCGTTGACTCCTTTTGGATGTTATAATCTGC 8722864 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| || |||||||||||| || || ||| | || | ||||||||| || || Sbjct 8722863 AAGAGTTCGACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGAGG 8722804 Query 18218 CACGCCTTCCTTATC 18232 | |||||||||||| Sbjct 8722803 GATGCCTTCCTTATC 8722789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379306255746180