Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq8164 497 2e-135 seq5 199 6e-46 seq7 149 1e-30 >seq8164 Length=157712 Score = 497 bits (550), Expect = 2e-135 Identities = 678/944 (72%), Gaps = 2/944 (0%) Strand=Plus/Minus Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGCTTTATCG 211669 |||| |||||||||||| | |||||||| | | | | ||||| | ||||| Sbjct 1322 TTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTA 1263 Query 211670 TAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTT 211729 | || ||||| || |||||||| || ||||| || || || |||||||| || |||| | Sbjct 1262 TTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGAT 1203 Query 211730 CATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCG 211789 | || | ||||| ||||| || || |||||||| || |||| | || || || | Sbjct 1202 CTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAG 1143 Query 211790 GTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTG 211849 |||| ||||| || || || |||||||| || | ||||||| ||| | ||||| |||| Sbjct 1142 GTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTG 1083 Query 211850 GTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGAC 211909 ||||||| | | | | | |||||| | | || | | |||||||| | Sbjct 1082 GTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTG 1023 Query 211910 AGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCAC 211969 ||||||||||| | |||| | |||||||| |||||||| |||||| |||||||| | Sbjct 1022 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTC 963 Query 211970 CTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAG 212029 |||| |||| ||| ||||| ||| | | || ||| | ||||| || || || | Sbjct 962 CTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTG 903 Query 212030 ACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAAC 212089 |||||||||| |||| || || || || |||||||||||| | ||||||||||| || | Sbjct 902 ACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGC 843 Query 212090 ATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCAT 212149 | |||||||||||||||||||| || ||| ||| || || ||| | ||||| || | Sbjct 842 ACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCC 783 Query 212150 TATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTT 212209 ||||| ||||||||| || || | || || ||| | ||| | |||||||| | Sbjct 782 TATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAA 723 Query 212210 TAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTG 212269 || || || | ||||||| ||||| ||||| ||||| || ||||| ||||| | Sbjct 722 ATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAG 663 Query 212270 CTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAA 212329 | || ||||| || || || || | |||||||| ||||| |||||||| | Sbjct 662 CCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTT 603 Query 212330 GTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTA 212389 |||||| |||||||| || | |||||||| | || | ||||| ||| || | |||| Sbjct 602 CTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTA 543 Query 212390 TCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCAT 212449 || |||| ||||| |||||| ||||||| || || ||||| ||||| || |||||| | Sbjct 542 TCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGAT-AGT 484 Query 212450 CA-GGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAA 212508 || ||| || || |||||||| |||| || ||||| | || ||||||||||||||| Sbjct 483 CAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAA 424 Query 212509 GTTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 |||||||| ||| | ||||| || || ||||| || || |||| Sbjct 423 GTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGC 380 >seq5 Length=26133890 Score = 199 bits (220), Expect = 6e-46 Identities = 242/327 (74%), Gaps = 2/327 (1%) Strand=Plus/Plus Query 212227 GGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTC 212286 ||||||| ||||| ||||| ||||| || ||||| ||||| || || ||||| || || Sbjct 9071214 GGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTT 9071273 Query 212287 GGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCTC 212346 || || | |||||||| ||||| ||| |||| | |||||| || ||||| Sbjct 9071274 GGCCGATTGATCTTCCAATATGCTAGTTTCGACAATTCTCGTTCTTTACATTTATTCCTA 9071333 Query 212347 GCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTC 212406 || | |||||||| | || | ||||| ||| || | |||||| |||| ||||| ||| Sbjct 9071334 GCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTC 9071393 Query 212407 AACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAG-GTTGTTCC 212465 ||| ||||||| || || ||||| ||||| || |||||| ||||| | || || Sbjct 9071394 AACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAG-TCAGGGTCGTGTAATTAA 9071452 Query 212466 TACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAA 212525 || ||||| |||| || ||||| | || ||||||||||||||||||||||| ||| | || Sbjct 9071453 TAATTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 9071512 Query 212526 TGCACACAACTTCCCACTTGACTTAGC 212552 ||| || || ||||| || || |||| Sbjct 9071513 TGCTCATAATTTCCCTCTAGATCTAGC 9071539 >seq7 Length=17044513 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 211897 TACATGGGAAGACAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTT 211956 |||||||| | ||||||||||| | |||| | |||||||| |||||||| |||| Sbjct 8091058 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTT 8090999 Query 211957 GCTTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAG 212016 || |||||||| | ||| |||| ||| ||||| || | | || ||| | ||||| Sbjct 8090998 GCATATTCAGCTCATGTTGCAGCTGCTACTGCTGTTTTTTTGATATATCCAATTGGTCAA 8090939 Query 212017 GGTTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTA 212076 || || || || |||||||| |||| || || || | |||||||||||| | ||| Sbjct 8090938 GGAAGCTTTTCTGATGGTATGCCCCTAGGAATCTCCGGTATTTTCAACTTCATGATTGTA 8090879 Query 212077 TTCCAAGCAGAACATAACATCCTTATGCACCCATT 212111 |||||||| || || |||||||||||||||||||| Sbjct 8090878 TTCCAAGCTGAGCACAACATCCTTATGCACCCATT 8090844 Score = 111 bits (122), Expect = 3e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 211956 TGCTTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCA 212015 ||| |||||||| ||||| |||| ||| ||||| ||| | | || ||| | ||||| Sbjct 8087222 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCA 8087163 Query 212016 GGGTTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGT 212075 || || || || |||||||| |||| || || || | |||||||||||| | || Sbjct 8087162 AGGAAGCTTTTCTGATGGTATGCCCCTAGGAATCTCCGGTATTTTCAACTTCATGATTGT 8087103 Query 212076 ATTCCAAGCAGAACATAACATCCTTATGCACCCATT 212111 ||||||||| || || ||||||||||||||| |||| Sbjct 8087102 ATTCCAAGCTGAGCACAACATCCTTATGCACTCATT 8087067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807472788991840