Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq8164 551 6e-152 seq5 199 5e-46 seq7 174 2e-38 seq3 84.2 3e-11 >seq8164 Length=157712 Score = 551 bits (610), Expect = 6e-152 Identities = 703/968 (73%), Gaps = 0/968 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || |||| ||||| ||||| ||||||||||| Sbjct 1353 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 1294 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 | |||| | ||| | | ||||| |||||||||| || || || || || || Sbjct 1293 ACTTTATTGACCGCAACTTCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGAT 1234 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | |||||||| | || || || | ||||| ||||| || || ||| Sbjct 1233 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCT 1174 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| | || || || ||| | ||||| || || || |||||||| Sbjct 1173 GGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCG 1114 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 || | | ||||| ||||| || ||||||||||||||| || || || | | |||||| Sbjct 1113 GCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTC 1054 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || |||||||||| | |||||||||| | |||| | |||||| Sbjct 1053 TTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 994 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| |||||||| ||||| || |||| || ||||| ||||| Sbjct 993 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTG 934 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | ||||| | ||||| ||| || || ||||| ||||| ||||| ||||| ||||| Sbjct 933 ATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACT 874 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||||||| | ||||||||||| ||||||||||| |||||||||||||| || ||| Sbjct 873 TTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATG 814 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || ||| || ||||| || || | ||| Sbjct 813 TTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTA 754 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || ||||| || || || || | || |||| |||| Sbjct 753 ACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 694 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || || || || || ||||| || ||||| || | ||| Sbjct 693 GGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATC 634 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || |||||| |||| | | || |||||||| ||| | | ||| Sbjct 633 TTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCT 574 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| || | | ||||| |||| ||||| || ||| | ||||| Sbjct 573 GTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGT 514 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 ||||| ||||| || || | || ||| | ||| ||| || ||| ||||| || Sbjct 513 TTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGAT 454 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 || ||||| | || ||||| ||||||||||| |||||||| |||||||| || || ||| Sbjct 453 ATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTC 394 Query 170659 CCACTTGA 170666 || || || Sbjct 393 CCTCTAGA 386 >seq5 Length=26133890 Score = 199 bits (220), Expect = 5e-46 Identities = 236/320 (74%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 170347 GGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTT 170406 || |||| |||||| ||||| |||||||| || || || || || || ||||| || ||| Sbjct 9071214 GGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTT 9071273 Query 170407 GGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTT 170466 || || | ||||||||||||||||| || ||||| |||| | | || || ||||| Sbjct 9071274 GGCCGATTGATCTTCCAATATGCTAGTTTCGACAATTCTCGTTCTTTACATTTATTCCTA 9071333 Query 170467 GCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTT 170526 ||| | | ||||||||| | |||||||| || | | ||||| |||| ||||| || Sbjct 9071334 GCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTC 9071393 Query 170527 AACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCT 170586 ||| | ||||| ||||| ||||| || || | || ||| | ||| ||| || | Sbjct 9071394 AACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAAT 9071453 Query 170587 ACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAAT 170646 | ||||| || || ||||| | || ||||| ||||||||||| |||||||| |||||| Sbjct 9071454 AATTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 9071513 Query 170647 GCACACAACTTCCCACTTGA 170666 || || || ||||| || || Sbjct 9071514 GCTCATAATTTCCCTCTAGA 9071533 >seq7 Length=17044513 Score = 174 bits (192), Expect = 2e-38 Identities = 200/269 (74%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 169963 AACGGTGGTCCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATG 170022 || |||||||||||| || || || | | || ||| | | || || || ||||||| Sbjct 8091112 AATGGTGGTCCTTATGAACTAATTGTTCTACAGTTCTTACTTGGTATAGCTTGCTACATG 8091053 Query 170023 GGTAGACAGTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATAT 170082 ||| | |||||||||| | |||| | |||||||| |||||||| ||| |||||| Sbjct 8091052 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATAT 8090993 Query 170083 TCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCT 170142 || |||| || |||| || ||||| || || | ||||| | ||||| ||| Sbjct 8090992 TCAGCTCATGTTGCAGCTGCTACTGCTGTTTTTTTGATATATCCAATTGGTCAAGGAAGC 8090933 Query 170143 TTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAA 170202 || || || || ||||| ||||| ||||| |||| || ||||||||| | ||||||||| Sbjct 8090932 TTTTCTGATGGTATGCCCCTAGGAATCTCCGGTATTTTCAACTTCATGATTGTATTCCAA 8090873 Query 170203 GCAGAGCACAACATTCTTATGCACCCATT 170231 || ||||||||||| |||||||||||||| Sbjct 8090872 GCTGAGCACAACATCCTTATGCACCCATT 8090844 Score = 122 bits (134), Expect = 1e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 170077 GCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAG 170136 |||||||| ||||| || |||| || ||||| ||||| | ||||| | ||||| Sbjct 8087221 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAA 8087162 Query 170137 GGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTA 170196 ||| || || || || ||||| ||||| ||||| |||| || ||||||||| | ||| Sbjct 8087161 GGAAGCTTTTCTGATGGTATGCCCCTAGGAATCTCCGGTATTTTCAACTTCATGATTGTA 8087102 Query 170197 TTCCAAGCAGAGCACAACATTCTTATGCACCCATT 170231 |||||||| ||||||||||| ||||||||| |||| Sbjct 8087101 TTCCAAGCTGAGCACAACATCCTTATGCACTCATT 8087067 >seq3 Length=24358521 Score = 84.2 bits (92), Expect = 3e-11 Identities = 80/101 (79%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 170131 GGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATG 170190 ||| ||| | |||| || ||| | |||| ||| | ||||| |||| || ||||| ||| Sbjct 12884646 GGTTAGGAAGCTTT-TCTGACTGTATGCTCCTATGGATCTCCTGTACTTTAAACTTTATG 12884704 Query 170191 TTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATT 170231 | ||||||||||| ||||||||||| ||||||||||||| Sbjct 12884705 ATTGTATTCCAAGCTGAGCACAACATCTTTATGCACCCATT 12884745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582788520361600