Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq8164 619 1e-172 seq5 215 6e-51 seq7 206 3e-48 >seq8164 Length=157712 Score = 619 bits (686), Expect = 1e-172 Identities = 732/986 (74%), Gaps = 4/986 (0%) Strand=Plus/Plus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | ||||| ||||| || |||||||| ||||| |||||||||||||| Sbjct 380 GCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 439 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 || || |||| | ||| ||||| ||||| | ||||| || ||||| || | | Sbjct 440 GCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCAACTACAGAT 499 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 |||||||| ||||| ||||| | || || ||||| ||||| | ||| | ||| | |||| Sbjct 500 TGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTAAAC 559 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || || || || ||||||||||| | ||| || || | ||||||| ||||||||| Sbjct 560 CAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAA 619 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 |||||| |||||||| | || || || || || ||||| || || |||||||| ||| Sbjct 620 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAGGTT 679 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || || ||||||||||| ||||||| | || || |||||||||| ||||| | | Sbjct 680 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 739 Query 84333 ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACA 84392 || | | ||| || || | || |||||||| ||| |||||| | || ||||||||| Sbjct 740 ATCAAACTAGAGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 799 Query 84393 CCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACA 84452 ||||| || || ||||||||||| || |||||||||||||| || || || ||||| ||| Sbjct 800 CCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACA 859 Query 84453 AGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGC 84512 | |||| ||||||| || || ||||| || || ||||| || ||||| || ||||| Sbjct 860 ATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAAAAGCTTCCTTGA 919 Query 84513 CCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACA 84572 || | ||||| | | ||| ||||||| || |||||||| ||||| || || |||||| Sbjct 920 CCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 979 Query 84573 CAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCA 84632 ||||| || |||||||| ||||| | ||||||||| ||||||||||||| |||| Sbjct 980 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGT-AGCA 1038 Query 84633 A-ATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCA 84691 | | |||||| | |||||| | |||| |||| |||||| ||||| || |||| ||| Sbjct 1039 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACCA 1098 Query 84692 TTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGA 84751 ||| || | || |||||||| || || || || || | ||| ||||| ||||| Sbjct 1099 TTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATAGCTGCAGAGGT 1158 Query 84752 TGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTC 84811 |||| | |||||||||||| || |||||||| || | | ||| |||| || || || Sbjct 1159 AGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGAAACAGGTTC 1218 Query 84812 ACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAG 84870 ||| ||||| |||||||| ||||| |||||| ||| ||| ||||| || || ||||| || Sbjct 1219 ACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATAAATACAGA-AG 1277 Query 84871 TGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGT 84930 | || | | || ||| || ||||| | | |||||||| |||| || | |||||| | Sbjct 1278 TTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTT 1337 Query 84931 TAGTGGAGGTGACCCAATCACAGAAG 84956 |||| ||| | ||| | ||| ||| Sbjct 1338 CAGTGCTGGTTATCCAGTTACAAAAG 1363 >seq5 Length=26133890 Score = 215 bits (238), Expect = 6e-51 Identities = 257/349 (74%), Gaps = 0/349 (0%) Strand=Plus/Minus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | ||||| ||||| || |||||||| ||||| |||||||||||||| Sbjct 9071539 GCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 9071480 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 || || |||| | ||| ||||| |||| | ||||| || ||||| || | | Sbjct 9071479 GCGCGGTTAATAATATCAGCCCAATTATTAATTACACGACCCTGACTATCAACTACAGAT 9071420 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 |||||||| ||||| ||||| | || || ||||| ||||| | ||| | ||| | |||| Sbjct 9071419 TGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTAAAC 9071360 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || || || || ||||||||||| | ||| || || | ||||||| ||||| ||| Sbjct 9071359 CAGATACCTACTACAGGCCAAGCAGCTAGGAATAAATGTAAAGAACGAGAATTGTCGAAA 9071300 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 |||||| |||||||| | || || || || || ||||| || || |||||||| ||| Sbjct 9071299 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAGGTT 9071240 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTG 84321 || || ||||||||||| ||||||| | || ||| |||||||| Sbjct 9071239 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGAGTTATTTTCTG 9071191 >seq7 Length=17044513 Score = 206 bits (228), Expect = 3e-48 Identities = 373/553 (67%), Gaps = 47/553 (8%) Strand=Plus/Plus Query 84406 ACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGA 84465 |||| |||| || |||||||||||||| || || || ||||| |||| |||| |||||| Sbjct 8090836 ACATTAGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGA 8090895 Query 84466 ACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATACA 84525 | | || ||||| || || ||||| |||||||| || ||||| || | ||||| | Sbjct 8090896 AAATACCGGAGATTCCTAGGGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGATATA 8090955 Query 84526 CAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGAC 84585 | || ||||||| || |||||||| |||| || || |||||| ||||| || | Sbjct 8090956 TCAAAAAAACAGCAGTAGCAGCTGCAACATGAGCTGAATATGCAACAGCAATCCAAGGGC 8091015 Query 84586 GCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAA-ATGCACCAATC 84644 ||||||| ||||| | ||||||||| ||||||||||||| ||||| | ||||| Sbjct 8091016 GCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGT-AGCAAGCTATACCAAGT 8091074 Query 84645 AGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTT 84704 | ||| || | |||| |||| |||||| |||||||| | Sbjct 8091075 AAGAACTGTAGAACAATTAGTTCATAAGGACCACCATTGT-------------------- 8091114 Query 84705 GCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCA 84764 || | ||| ||||| |||||| |||| | |||| Sbjct 8091115 -----------------------GTGCAAACCTATAGCTATAGAGGTAGGAATAATGGCA 8091151 Query 84765 CCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCA 84824 |||||||| || ||||||| || | | ||| |||| || | ||||| ||||| ||| Sbjct 8091152 CCAGAAATAATATTGTTTCTATAAAGTAAAGATCCAGAAACATGTTCACGAATACCATCA 8091211 Query 84825 ATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAG 84883 ||||| ||||| |||||| ||| ||| ||||| || || ||| | ||| || | | || Sbjct 8091212 ATATCTACTGGAGGTGCAACAATGAAAGCAATAATAAATACATA-AGTTGCGGTCAATAA 8091270 Query 84884 AGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGAC 84943 ||| || ||||| | | |||||||| |||| || | | |||| | |||| || | Sbjct 8091271 AGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGATGGTTTTCAGTGCTAGTTAT 8091330 Query 84944 CCAATCACAGAAG 84956 ||| | ||| ||| Sbjct 8091331 CCAGTTACAAAAG 8091343 Score = 111 bits (122), Expect = 2e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 84406 ACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGA 84465 |||| |||| | |||||||||||||| || || || ||||| |||| |||| |||||| Sbjct 8087059 ACATTAGAAATGAGTGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGA 8087118 Query 84466 ACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATACA 84525 | | || ||||| || || ||||| |||||||| || ||||| || | ||||| | Sbjct 8087119 AAATACCGGAGATTCCTAGGGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGATATA 8087178 Query 84526 CAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCA 84569 | ||| ||||||| || |||||||| ||||| || || ||| Sbjct 8087179 TCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCA 8087222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571215301529120