Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq8164 475 1e-129 seq5 188 2e-43 seq7 143 8e-30 >seq8164 Length=157712 Score = 475 bits (526), Expect = 1e-129 Identities = 703/987 (71%), Gaps = 8/987 (1%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 |||||| | ||| | || || ||||| |||||||| || | |||||||| || || | Sbjct 1362 TTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1303 Query 25862 ATGATACCCTGCTTACTCG-CAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCAC 25919 ||||| |||| ||| | | | || ||| | ||| ||||| |||| ||||| || |||| Sbjct 1302 ATGAT-CCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCATTGCTGCAC 1245 Query 25920 CGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACA 25979 | || |||||||| ||||| || ||||| || ||||| || || ||| | || ||||||| Sbjct 1244 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACA 1185 Query 25980 ATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGA 26039 |||| || || || || | | || ||||| || || || | || |||||||||| Sbjct 1184 ATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGA 1125 Query 26040 TCTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTA 26099 | |||||||| | | | || || ||| ||||||| || || || ||| |||| ||| Sbjct 1124 TATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTG 1065 Query 26100 TCTTCCACTTCTTAATAGGAGTAGCA-GC-ATATGCAGGGAGACAGTGGGAACTATCTTA 26157 | | ||||||||| | || ||||| || | ||| || | |||||||||| || Sbjct 1064 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATG--GGTCGTGAGTGGGAACTTAGTTT 1007 Query 26158 CAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCT 26217 | | || || ||| | || ||||| |||||||||| |||| || | | || ||| Sbjct 1006 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 947 Query 26218 CGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGG 26277 || || ||||| | ||||| | || ||||| || ||| ||| || ||||| || || Sbjct 946 TGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGG 887 Query 26278 TATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCA 26337 ||||| |||||||| ||||| ||| | ||||||||||| || || || || || ||||| Sbjct 886 AATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 827 Query 26338 CCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCA 26397 |||||| || ||| || || ||||| || ||||| || | || ||| ||||||||| Sbjct 826 CCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 767 Query 26398 CGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTA 26457 || ||||| || || | || ||||| ||||| | | || ||| | Sbjct 766 TGGGTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 707 Query 26458 TGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTT 26517 || || | || || ||||| ||||| || |||||||| || || || || || || || Sbjct 706 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTT 647 Query 26518 TGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCT 26577 ||| |||| || || || ||||| ||||| || || |||||| | |||||||| || Sbjct 646 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCT 587 Query 26578 TGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATT 26637 ||| ||||||| || || || || ||| | || || | |||||| |||| ||||| || Sbjct 586 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTT 527 Query 26638 TAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACC 26697 ||| ||||||||||||| || || || || ||||| ||| | | || |||| Sbjct 526 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 467 Query 26698 TACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAA 26757 ||| ||||||||| | | ||||| |||||||| || | ||||||||||| || ||||| Sbjct 466 TACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 407 Query 26758 TGCTCATAACTTTCCACTTGACTTAGC 26784 ||||||||| || || || || |||| Sbjct 406 TGCTCATAATTTCCCTCTAGATCTAGC 380 >seq5 Length=26133890 Score = 188 bits (208), Expect = 2e-43 Identities = 232/317 (73%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 26468 TTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTA 26527 || || ||||| ||||| || |||||||| || || || || || || ||||| |||| Sbjct 9071223 TTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTG 9071282 Query 26528 ATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGG 26587 || || || ||||| ||||| | || |||||| | ||||| || || ||| ||||| Sbjct 9071283 ATCTTCCAATATGCTAGTTTCGACAATTCTCGTTCTTTACATTTATTCCTAGCTGCTTGG 9071342 Query 26588 CCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAAT 26647 || || || || || ||| | || || | |||||| |||| ||||| || ||| ||||| Sbjct 9071343 CCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAAT 9071402 Query 26648 GGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCT 26707 |||||||| || || || || ||||| ||| | | || |||| || |||||| Sbjct 9071403 GGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATAATTGGGCT 9071462 Query 26708 GATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAAC 26767 ||| | | ||||| |||||||| || | ||||||||||| || |||||||||||||| Sbjct 9071463 GATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAAT 9071522 Query 26768 TTTCCACTTGACTTAGC 26784 || || || || |||| Sbjct 9071523 TTCCCTCTAGATCTAGC 9071539 >seq7 Length=17044513 Score = 143 bits (158), Expect = 8e-30 Identities = 359/546 (66%), Gaps = 51/546 (9%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 |||||| | ||| | || || ||||| |||| ||| || | |||||||| || || | Sbjct 8091342 TTTTGTAACTGGATAACTAGCACTGAAAACCATCTTTACATTGGATGGTTTGGTGTTTTG 8091283 Query 25862 ATGATACCCTGCTTACTCG-CAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCAC 25919 ||||| |||| ||| | | | || ||| |||| ||||| |||| ||||| | |||| Sbjct 8091282 ATGAT-CCCTACTTTATTGACCGCAACTT-ATGTATTTATTATTGCTTTCATTGTTGCAC 8091225 Query 25920 CGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACA 25979 | || |||||||| ||||| || ||||| | ||||| || || ||| | || |||||| Sbjct 8091224 CTCCAGTAGATATTGATGGTATTCGTGAACATGTTTCTGGATCTTTACTTTATAGAAACA 8091165 Query 25980 ATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGA 26039 |||| || || || || | | || |||||| || || || ||| Sbjct 8091164 ATATTATTTCTGGTGCCATTATTCCTACCTCTATAGCTATAGG--------TTT------ 8091119 Query 26040 TCTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTA 26099 |||||| ||||| || || ||| |||| ||| Sbjct 8091118 ------------GCACAC-----------------AATGGTGGTCCTTATGAACTAATTG 8091088 Query 26100 TCTTCCACTTCTTAATAGGAGTAGCA-GC-ATATGCAGGGAGACAGTGGGAACTATCTTA 26157 | | || |||||| | || |||| || | ||| || | |||||||||| || Sbjct 8091087 TTCTACAGTTCTTACTTGGTATAGCTTGCTACATG--GGTCGTGAGTGGGAACTTAGTTT 8091030 Query 26158 CAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCT 26217 | | || || ||| | || ||||| |||||||||| |||| | | | || ||| Sbjct 8091029 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCATGTTGCAGCTGCTAC 8090970 Query 26218 CGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGG 26277 || || || || | ||||| | || ||||| || ||| |||||| ||||| || || Sbjct 8090969 TGCTGTTTTTTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCCCTAGG 8090910 Query 26278 TATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCA 26337 ||||| |||| ||| ||||| ||| | ||||||||||| || || || || || ||||| Sbjct 8090909 AATCTCCGGTATTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 8090850 Query 26338 CCCATT 26343 |||||| Sbjct 8090849 CCCATT 8090844 Score = 98.7 bits (108), Expect = 3e-16 Identities = 121/164 (74%), Gaps = 1/164 (1%) Strand=Plus/Minus Query 26181 TATTTGT-TGCATATACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCT 26239 ||||| | ||||||| |||| || | | || ||| || || ||||| | ||||| Sbjct 8087230 TATTTTTCTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCA 8087171 Query 26240 TTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTT 26299 | || ||||| || ||| |||||| ||||| || || ||||| |||| ||| ||||| Sbjct 8087170 ATTGGTCAAGGAAGCTTTTCTGATGGTATGCCCCTAGGAATCTCCGGTATTTTCAACTTC 8087111 Query 26300 ATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATT 26343 ||| | ||||||||||| || || || || || |||||| |||| Sbjct 8087110 ATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACTCATT 8087067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146712175242336