Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4 183 6e-41 >seq4 Length=23934096 Score = 183 bits (202), Expect = 6e-41 Identities = 391/575 (68%), Gaps = 13/575 (2%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || |||||||||||||||||||| | || |||||||||||| ||| ||||| Sbjct 23381224 GAAATCTGGGAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACCGCCGAGGAGGTTGAT 23381165 Query 25534 CTGGCCAAGGACATGGACGGC--TGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 || | ||||| | ||| | ||| | ||||| || | |||| |||| || ||| Sbjct 23381164 CTCTGCCAGGACCT--ACGCCATTGGGAAACTCTAACCCCTGGCGAGAAGCACTTCATCA 23381107 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 ||||| | || ||||| || |||||||| || || || |||||||| || | Sbjct 23381106 CCCACGTGCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTTTTGGAGAATCTCGCCGGAA 23381047 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | |||| | |||||| ||| | ||||| |||||||| |||||||| |||| Sbjct 23381046 GGTTCATGAAGGAAGTCCAGGTCTCCGAGGCTCGCGCCTTCTACGGCTTCCAGATCGCCA 23380987 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCG 25771 |||| || | ||||| ||| |||| | |||||| ||| ||||| | ||| | Sbjct 23380986 TCGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTGGAGACCTACATCAAGGACTCGG 23380927 Query 25772 CCGAGAGAGATC-GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 ||||| ||| | |||| ||| || ||||| ||| ||| || ||| | |||||| Sbjct 23380926 ACGAGA-AGAACAGGCTTTTTCACGCGATCGATACCATTCCCTGCGTCACCAAGAAGGCC 23380868 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 | ||||||| | |||||| || || |||| |||||| |||||| | || || Sbjct 23380867 CAGTGGGCCCTACGCTGGATCGACGGCTCAGA----ATCGTTTGCGGAGCGGATCGTGGC 23380812 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTC-AGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 ||||||| ||||| || || || ||| | || ||||| || || || ||||| | Sbjct 23380811 CTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGGAGTTTTTGC-GCGATATTTTGGCTAA 23380753 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || ||| ||||| || ||| || || |||||| | ||| || || |||| Sbjct 23380752 AGAAGCGCGGGTTAATGCCGGGACTGACGTTCTCAAACGAGTTGATCTCGAGAGATGAGG 23380693 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACG 26043 || | ||| | || || || ||| |||| ||| || Sbjct 23380692 GTTTGCACTGCGACTTCGCGTGCTTGCTGTACTCG 23380658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928750011388160