Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq8164 87.8 3e-12 >seq8164 Length=157712 Score = 87.8 bits (96), Expect = 3e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 169725 TTAGGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTC 169784 || ||||||||| ||| |||||| |||| ||||||||||| |||||| | |||||||| Sbjct 31793 TTGGGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTC 31735 Query 169785 GAGCCCCGTCAGTCC 169799 ||||||||||||||| Sbjct 31734 GAGCCCCGTCAGTCC 31720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777552642654400