Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1 116 2e-21 >seq1 Length=26753024 Score = 116 bits (128), Expect = 2e-21 Identities = 160/222 (72%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123 ||||||| ||||| ||||| |||||||| || || | || || ||||| |||||| || Sbjct 12870846 TACCTTTCCTTTTGCCTCCCCCTTGATCAACATAACGAGCTGTATCATTAAAAACTCGCA 12870905 Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183 |||||||||| | ||| | ||| || ||||| | | |||| | | ||||| | | Sbjct 12870906 ACATTGGAACAATGCCATTGGAAGTCCCATTTGTTCCACGAATATAGCTGCCTGTGGCAC 12870965 Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC-- 26241 ||| | |||| || | ||| ||||| |||||| |||| ||| | ||||| || Sbjct 12870966 GAATGTTGTGAACAGAGACACCAATTCCTCCAGCCGATTTGCTGATAACAGCACATTCCT 12871025 Query 26242 TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 | ||| ||||| |||| |||| ||||||||| ||||||| Sbjct 12871026 TCAAA--GTATCATAAATGCCTTCAATGCTATCATCTTTCAT 12871065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253014822836300