Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq8164 569 6e-158 seq5 230 7e-56 seq7 194 5e-45 >seq8164 Length=157712 Score = 569 bits (630), Expect = 6e-158 Identities = 736/1009 (73%), Gaps = 8/1009 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || |||||||||||| | || ||| | ||||||||||| |||| |||||| Sbjct 1371 TGGGGTCGCTTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 1312 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| ||||||| || | | | | || || | ||| |||||| | |||||||| Sbjct 1311 GGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCAT 1253 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 |||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||| | || || Sbjct 1252 TGCTGCACCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTA 1193 Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518 ||| ||||| || || ||||||||| | | |||| | | || || || | || || Sbjct 1192 TGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTT 1133 Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578 || |||| |||||||| | || |||| |||||| | ||||| || || |||||| | Sbjct 1132 TTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGA 1073 Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638 || | || | |||||| | | ||| | | ||| |||| || || |||||||| Sbjct 1072 ACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACT 1013 Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGC 42698 | | ||| || || ||| | || ||||| |||||| || || || ||||| || || Sbjct 1012 TAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGC 953 Query 42699 AGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCC 42758 || ||||| || ||| | | |||||| |||| ||||| ||||| || || ||||| Sbjct 952 TGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCC 893 Query 42759 TCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCT 42818 || || || |||||||| |||||||||||| | || ||||| ||||| || ||||| || Sbjct 892 CCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCT 833 Query 42819 TATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGC 42878 |||||| || || || ||| | || || || || ||||| || || || | ||| || Sbjct 832 TATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGC 773 Query 42879 TATGCATGGTAGTCTT--GTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGC 42936 ||||||||| ||| | || |||||| | | | | ||||| || ||||| ||| Sbjct 772 TATGCATGG--GTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCT 715 Query 42937 CAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCAT 42996 ||| | || |||| |||||||||||||| || || ||||| || || || || ||| Sbjct 714 GCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCAT 655 Query 42997 GGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCA 43055 ||||| ||||| || | |||||||||||||| | |||| || ||| ||| ||||| || Sbjct 654 GGTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAATTCTCGTTCTTTACA 596 Query 43056 CTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTAC 43115 ||||| || || |||||||| || || || || ||||| || || | || |||| || Sbjct 595 TTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCAC 536 Query 43116 TATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCA 43175 |||||| || ||||| ||||||||||| || || ||||| | ||||||| |||| || Sbjct 535 TATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCG 476 Query 43176 TGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCA 43235 ||| || |||||||||||||||| | || || || |||||||| | || || ||||| Sbjct 475 TGTAATTAATACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCA 416 Query 43236 CGAGCGGAATGCACATAACTTCCCGCTTGATCTTGCATCCGTGGAGGTT 43284 || || ||||| ||||| ||||| || ||||| || | || || ||| Sbjct 415 TGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGAAGTT 367 >seq5 Length=26133890 Score = 230 bits (254), Expect = 7e-56 Identities = 260/346 (75%), Gaps = 2/346 (1%) Strand=Plus/Plus Query 42940 AATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGT 42999 ||| | || |||| |||||||||||||| || || ||||| || || || || |||||| Sbjct 9071208 AATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGT 9071267 Query 43000 TACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTT 43058 || ||||| || | |||||||||||||| | |||| | ||| ||| ||||| || || Sbjct 9071268 TATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCGACAATTCTCGTTCTTTACATTT 9071326 Query 43059 CTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTAT 43118 || || || |||||||| || || || || ||||| || || | || |||| ||||| Sbjct 9071327 ATTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTAT 9071386 Query 43119 GGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGT 43178 ||| || ||||| ||||||||||| || || ||||| | ||||||| |||| || ||| Sbjct 9071387 GGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGT 9071446 Query 43179 CATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGA 43238 || || ||||||||||||| | || || || |||||||| | || || ||||| || Sbjct 9071447 AATTAATAATTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGA 9071506 Query 43239 GCGGAATGCACATAACTTCCCGCTTGATCTTGCATCCGTGGAGGTT 43284 || ||||| ||||| ||||| || ||||| || | || || ||| Sbjct 9071507 ACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGAAGTT 9071552 >seq7 Length=17044513 Score = 194 bits (214), Expect = 5e-45 Identities = 369/552 (67%), Gaps = 45/552 (8%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || |||||||||||| | ||| ||| | |||| |||||| |||| |||||| Sbjct 8091351 TGGGGTCGCTTTTGTAACTGGATAACTAGCACTGAAAACCATCTTTACATTGGATGGTTT 8091292 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| ||||||| || | | | | || || ||| |||||| | |||||||| Sbjct 8091291 GGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTA-TGTATTTATTATTGCTTTCAT 8091233 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 || ||| ||||| ||||| |||||||| |||||||||| ||| ||||| ||| | || || Sbjct 8091232 TGTTGCACCTCCAGTAGATATTGATGGTATTCGTGAACATGTTTCTGGATCTTTACTTTA 8091173 Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518 | | ||||| || || ||||||||| | | |||| | || || || || ||| Sbjct 8091172 TAGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTATAGCTATAGG------TTT 8091119 Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578 | | ||||||| || |||||| | Sbjct 8091118 GCAC-------------------------------------ACAATGGTGGTCCTTATGA 8091096 Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638 || | || | || ||| | | ||||| | ||| |||| || || |||||||| Sbjct 8091095 ACTAATTGTTCTACAGTTCTTACTTGGTATAGCTTGCTACATGGGTCGTGAGTGGGAACT 8091036 Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGC 42698 | | ||| || || ||| | || ||||| |||||| || || || | ||| || || Sbjct 8091035 TAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCATGTTGCAGC 8090976 Query 42699 AGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCC 42758 || ||||| || || | | |||||| |||| ||||| ||||| ||||| ||||| Sbjct 8090975 TGCTACTGCTGTTTTTTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCC 8090916 Query 42759 TCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCT 42818 || || || ||||||| |||||||||||| | || ||||| ||||| || ||||| || Sbjct 8090915 CCTAGGAATCTCCGGTATTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCT 8090856 Query 42819 TATGCATCCTTT 42830 |||||| || || Sbjct 8090855 TATGCACCCATT 8090844 Score = 114 bits (126), Expect = 4e-21 Identities = 121/158 (77%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 42675 TGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCA 42734 ||| || || || ||||| || || || ||||| || ||| | | |||||| |||| || Sbjct 8087222 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCA 8087163 Query 42735 AGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGT 42794 ||| ||||| ||||| ||||| || || || ||||||| |||||||||||| | || Sbjct 8087162 AGGAAGCTTTTCTGATGGTATGCCCCTAGGAATCTCCGGTATTTTCAACTTCATGATTGT 8087103 Query 42795 CTTCCAGGCTGAACATAACATTCTTATGCA-TCCTTTC 42831 ||||| ||||| || ||||| |||||||| || |||| Sbjct 8087102 ATTCCAAGCTGAGCACAACATCCTTATGCACTCATTTC 8087065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143518884853872