Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq8164 547 8e-151 seq5 201 1e-46 seq7 161 1e-34 >seq8164 Length=157712 Score = 547 bits (606), Expect = 8e-151 Identities = 706/973 (73%), Gaps = 6/973 (1%) Strand=Plus/Minus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | || | || ||||| |||||| | ||||||||| | | | | Sbjct 1340 CTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCG 1281 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | || | || ||| | || ||||||||||||||||| ||||| ||||||||||||| Sbjct 1280 CAACTTCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTC 1221 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 ||||||| || |||| |||||| | ||||| ||||| || || |||||||| || | | Sbjct 1220 GTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTC 1161 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 ||| || || || ||| | ||||| || || || |||||||| || | |||||| Sbjct 1160 CTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATG 1101 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCA 155290 | ||||| ||||| |||||||||| |||| | || | |||||| | | || | Sbjct 1100 AATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAG 1041 Query 155291 CAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCT 155350 | ||| |||||| ||||||||||| || |||||| || ||||| |||||||| Sbjct 1040 CTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTG 981 Query 155351 GTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCG 155410 ||||||||| || || || || | ||||| ||||| ||| | | ||||| | | Sbjct 980 CTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTG 921 Query 155411 GTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGT 155470 ||||||| || ||||| | ||||| || || ||||| |||||||| |||| ||| Sbjct 920 GTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGA 861 Query 155471 TCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAG 155530 | || |||||||| || ||||| |||||||||||||| || |||||| | || ||||| | Sbjct 860 TTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTG 801 Query 155531 GTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAA 155590 |||| ||||| || || || ||| ||||||||| || || ||||| || ||| | | Sbjct 800 GTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGTAACCTCTAGTTTGA 741 Query 155591 TCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAG 155650 || | ||||| || || | || ||| || | ||||||| ||||| ||||| |||| Sbjct 740 TCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAG 681 Query 155651 AAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCAT 155710 |||| ||||| || || || |||||||| || || || || | |||||||| ||||| Sbjct 680 AAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTA 621 Query 155711 CCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCT 155770 |||||||| || | | | || |||||||| ||||| |||||||| || | |||| Sbjct 620 GTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCT 561 Query 155771 GGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACC 155830 || || ||| | ||| | || ||||| |||||| | || ||||| || ||||| | Sbjct 560 GGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATC 501 Query 155831 AGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACC 155887 | |||||||| || |||| ||| || || ||| ||||| || ||| |||||| Sbjct 500 AATCTGTAGTTGA---TAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACC 444 Query 155888 GCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACC 155947 ||||| |||||||||||||| ||||| || ||||| ||||| || |||||||| || | Sbjct 443 GCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATC 384 Query 155948 TTGCTGCTGCTGA 155960 | ||||||| ||| Sbjct 383 TAGCTGCTGTTGA 371 >seq5 Length=26133890 Score = 201 bits (222), Expect = 1e-46 Identities = 248/338 (73%), Gaps = 6/338 (2%) Strand=Plus/Plus Query 155626 GGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTC 155685 ||||||| ||||| ||||| |||||||| ||||| || || || |||||||| || || Sbjct 9071214 GGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTT 9071273 Query 155686 GGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTT 155745 || || | |||||||| ||||| ||| |||| || | | | || || ||||| Sbjct 9071274 GGCCGATTGATCTTCCAATATGCTAGTTTCGACAATTCTCGTTCTTTACATTTATTCCTA 9071333 Query 155746 GCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTC 155805 ||||| |||||||| || | |||||| || ||| | ||| | || ||||| ||| Sbjct 9071334 GCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTC 9071393 Query 155806 AACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATC 155862 ||| | || ||||| || ||||| || |||||||| || |||| ||| || || Sbjct 9071394 AACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGA---TAGTCAGGGTCGTGTAATT 9071450 Query 155863 CCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGT 155922 || ||||| || ||| ||||||||||| |||||||||||||| ||||| || ||| Sbjct 9071451 AATAATTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGT 9071510 Query 155923 AACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 155960 || ||||| || |||||||| || || ||||||| ||| Sbjct 9071511 AATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 9071548 >seq7 Length=17044513 Score = 161 bits (178), Expect = 1e-34 Identities = 350/534 (66%), Gaps = 45/534 (8%) Strand=Plus/Minus Query 154978 TGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCT 155037 ||| ||||| |||| |||| | || | || ||||| |||||| | ||||||||| Sbjct 8091333 TGGATAACTAGCACTGAAAACCATCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 8091274 Query 155038 TGCCTCCTCGCTGCTGCTACATGC-TTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGA 155096 | | | || || ||| || ||| | || ||||||| ||||||||| ||||| Sbjct 8091273 ACTTTATTGACCGCAACTT-ATGTATTTATTATTGCTTTCATTGTTGCACCTCCAGTAGA 8091215 Query 155097 CATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTC 155156 ||||||||||||||||||| || |||| |||||| | ||| | ||||| || || || Sbjct 8091214 TATTGATGGTATTCGTGAACATGTTTCTGGATCTTTACTTTATAGAAACAATATTATTTC 8091155 Query 155157 TGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGC 155216 |||||| || | |||| || | || || ||| | ||| Sbjct 8091154 TGGTGCCATTATTCCTACCTCTATAGCTATAGGTTTGCAC-------------------- 8091115 Query 155217 AGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTT 155276 ||||||||||||||| |||| | || | || || Sbjct 8091114 -----------------------ACAATGGTGGTCCTTATGAACTAATTGTTCTACAGTT 8091078 Query 155277 CCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCAT 155336 | | | || || | ||| |||||| ||||||||||| || |||||| || || Sbjct 8091077 CTTACTTGGTATAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTAT 8091018 Query 155337 GCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCT 155396 ||| |||||||| ||||||||| || || | || | ||||| ||||| || | Sbjct 8091017 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCATGTTGCAGCTGCTACTGCTGTTTTTTT 8090958 Query 155397 TGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTAC 155456 | ||||| | |||||||| || ||||||| ||||| || || ||||| |||| Sbjct 8090957 GATATATCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCCCTAGGAATCTCCGGTAT 8090898 Query 155457 TTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTT 155510 ||| |||| ||| | || |||||||| || ||||| |||||||||||||| || Sbjct 8090897 TTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATT 8090844 Score = 93.3 bits (102), Expect = 5e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 155355 TGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCA 155414 |||||| || || || || | ||||| ||||| ||| | | ||||| | ||||| Sbjct 8087222 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCA 8087163 Query 155415 AGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGT 155474 ||| || ||||||| ||||| || || ||||| |||| ||| |||| ||| | || Sbjct 8087162 AGGAAGCTTTTCTGATGGTATGCCCCTAGGAATCTCCGGTATTTTCAACTTCATGATTGT 8087103 Query 155475 GTTCCAAGCAGAACACAATATCCTTATGCAC 155505 |||||||| || ||||| |||||||||||| Sbjct 8087102 ATTCCAAGCTGAGCACAACATCCTTATGCAC 8087072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584775517567840