Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq8164 547 8e-151 seq5 192 7e-44 seq7 161 1e-34 >seq8164 Length=157712 Score = 547 bits (606), Expect = 8e-151 Identities = 717/991 (72%), Gaps = 4/991 (0%) Strand=Plus/Plus Query 67353 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATT 67412 ||| ||||||| || || |||||||| || ||||| ||||| || |||||||||||||| Sbjct 371 TCAACAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 430 Query 67413 CCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGT-- 67470 ||||| || | ||||| || || ||||||||| ||| || ||| ||| | Sbjct 431 CCAAGGTTAGCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACC--CTGACTAT 488 Query 67471 CAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCA 67530 |||| || ||||| ||||| || ||||| || | |||||| |||||||| | ||| | Sbjct 489 CAACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTA 548 Query 67531 TTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTG 67590 || || |||||||| | || ||||| | ||||| |||||||| || | | | | Sbjct 549 AAGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAG 608 Query 67591 AGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAA 67650 | ||||||||| ||||| ||||||||||| || || || || |||||||| || || | Sbjct 609 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGA 668 Query 67651 TGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAG 67710 | || || || ||||| ||||| ||||| ||||||| | || || || | || | Sbjct 669 TATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTG 728 Query 67711 TAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAAC 67770 | ||||| ||||| | | ||| || || | || || ||||||||||| || || || | Sbjct 729 TGGTTTCCCTGATCAAACTAGAGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGC 788 Query 67771 CACCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTG 67830 | ||||||||||| ||||| || | ||| || |||||||||||||||||||||||||| | Sbjct 789 CGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAG 848 Query 67831 CTTGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGA 67890 ||||||| || | |||| |||| |||||||| || || || || ||||| ||||||| | Sbjct 849 CTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAAA 908 Query 67891 AAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAG 67950 | |||||||| | ||||| | |||||| ||||| || || | || ||||| | Sbjct 909 AGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTG 968 Query 67951 AGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGAC 68010 | ||||| ||| |||||||| |||||||| |||||| || ||||||||||| ||||| Sbjct 969 AATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGAC 1028 Query 68011 CACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCAT 68070 | ||| | | || | | |||||| | || | |||| |||| ||||| | Sbjct 1029 CCATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGT 1088 Query 68071 TATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTG 68130 | || ||||| ||||| | | || |||||||| || || || ||||| | ||| || | Sbjct 1089 TGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATAG 1148 Query 68131 CGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTG 68190 | || |||||| || ||||||||||| || ||||| || || | | || || | Sbjct 1149 CTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAG 1208 Query 68191 CAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGA 68250 ||||||||| | |||||||| ||||| ||||||||||| |||||||| ||||| || | Sbjct 1209 AAACAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATAA 1268 Query 68251 AGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGA 68310 | || | ||| | | || ||| |||||||| ||||| ||||| |||| || | Sbjct 1269 ATACAGAAGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAA 1328 Query 68311 TGCGATTGTCAACTGAGGTGACCCAGTTACA 68341 || || ||| ||| | ||||||||| Sbjct 1329 GACGGTTTTCAGTGCTGGTTATCCAGTTACA 1359 >seq5 Length=26133890 Score = 192 bits (212), Expect = 7e-44 Identities = 246/337 (73%), Gaps = 4/337 (1%) Strand=Plus/Minus Query 67353 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATT 67412 ||| ||||||| || || |||||||| || ||||| ||||| || |||||||||||||| Sbjct 9071548 TCAACAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 9071489 Query 67413 CCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGT-- 67470 ||||| || | ||||| || || |||||| || ||| || ||| ||| | Sbjct 9071488 CCAAGGTTAGCGCGGTTAATAATATCAGCCCAATTATTAATTACACGACC--CTGACTAT 9071431 Query 67471 CAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCA 67530 |||| || ||||| ||||| || ||||| || | |||||| |||||||| | ||| | Sbjct 9071430 CAACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTA 9071371 Query 67531 TTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTG 67590 || || |||||||| | || ||||| | ||||| ||||| || || | | | | Sbjct 9071370 AAGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAATAAATGTAAAGAACGAG 9071311 Query 67591 AGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAA 67650 | |||| |||| ||||| ||||||||||| || || || || |||||||| || || | Sbjct 9071310 AATTGTCGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGA 9071251 Query 67651 TGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACC 67687 | || || || ||||| ||||| ||||| ||||||| Sbjct 9071250 TATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACC 9071214 >seq7 Length=17044513 Score = 161 bits (178), Expect = 1e-34 Identities = 333/505 (66%), Gaps = 49/505 (10%) Strand=Plus/Plus Query 67803 AATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCA 67862 |||||||||||||||||||||||||| |||||||| || | |||| |||| ||| |||| Sbjct 8090844 AATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGAAAATACCG 8090903 Query 67863 GAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACCAAGAAC 67922 || || || || ||||| | ||||| || |||||||| | ||||| | ||| || Sbjct 8090904 GAGATTCCTAGGGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGATATATCAAAAAA 8090963 Query 67923 ACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACACAGATCCAAGGACGCATACCA 67982 ||||| || || | || |||| || ||||| ||| |||||||| |||||||| Sbjct 8090964 ACAGCAGTAGCAGCTGCAACATGAGCTGAATATGCAACAGCAATCCAAGGGCGCATACCC 8091023 Query 67983 AGACGGTAAGAAAGTTCCCACTGACGACCACAGTATGCTGTGATTCCGATAAGGAAGTGG 68042 |||||| || ||||||||||| |||||| ||| | || || | | ||| || Sbjct 8091024 AGACGGAAACTAAGTTCCCACTCACGACCCATGTAGCAAGCTATACCAAGTAAGAACTGT 8091083 Query 68043 AAGACTACAAGTTGGAAAGGTCCACCATTATACAACCACTCATCTAGAGTTGCTGCTTCC 68102 | || | |||| |||| |||||||| | Sbjct 8091084 AGAACAATTAGTTCATAAGGACCACCATTGT----------------------------- 8091114 Query 68103 CAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTAGGAACAACAGCACCAGAAATG 68162 ||| | ||| || || | || |||||| || ||||||||||| Sbjct 8091115 --------------GTGCAAACCTATAGCTATAGAGGTAGGAATAATGGCACCAGAAATA 8091160 Query 68163 ATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCTCTGATACCATCGATATCAACT 68222 || ||||| | || | | || || | |||| |||| | |||||||| ||||| ||| Sbjct 8091161 ATATTGTTTCTATAAAGTAAAGATCCAGAAACATGTTCACGAATACCATCAATATCTACT 8091220 Query 68223 GGAGGTGCTGCAATGAATGCAATGATGAA---GCAAGTTGCTGCTGCGAGCAAGCAAGGA 68279 |||||||| ||||||| ||||| || || ||||||| | | | ||| ||| Sbjct 8091221 GGAGGTGCAACAATGAAAGCAATAATAAATACATAAGTTGCGG--TCAATAAAG-TAGGG 8091277 Query 68280 ATCATCAACACACCGAACCAACCAA 68304 |||||||| ||||| ||||| |||| Sbjct 8091278 ATCATCAAAACACCAAACCATCCAA 8091302 Score = 109 bits (120), Expect = 6e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 67803 AATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCA 67862 |||| ||||||||||||||||||||| |||||||| || | |||| |||| ||| |||| Sbjct 8087067 AATGAGTGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGAAAATACCG 8087126 Query 67863 GAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACCAAGAAC 67922 || || || || ||||| | ||||| || |||||||| | ||||| | |||||| Sbjct 8087127 GAGATTCCTAGGGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGATATATCAAGAAA 8087186 Query 67923 ACAGCGAATGCTGCAGACACTGGAGCAGAGTATGC 67957 ||||| || || | || ||||| || ||||| Sbjct 8087187 ACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 8087221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566889343038240