Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 7e-14 >seq5 Length=26133890 Score = 93.3 bits (102), Expect = 7e-14 Identities = 164/238 (69%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | | || || || ||||| ||| | || | || || || | | Sbjct 18099828 TGCAAATATTTGTCAGGACTTTGACTGGAAAGACA-TCACCCTGGAGGTGGAGGGTTCGG 18099886 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||| || || || ||| || ||||| || ||||| || |||| Sbjct 18099887 ATACCATAGACAATGTCAAGGCAAAGATTCAAGACAAGGAAGGGATCCCACCTGACCAAC 18099946 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || ||||||||||| || || | || ||| || || || |||| ||||||| Sbjct 18099947 AAAGGCTTATTTTTGCAGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCAGAATATAATA 18100006 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | || || ||||| ||| | ||| | || | |||||||| || || | ||||||| Sbjct 18100007 TCCAGAAGGAATCTACTTTGCATCTTGTTCTTCGATTAAGGGGTGGGATGCAAATATT 18100064 Score = 87.8 bits (96), Expect = 3e-12 Identities = 162/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || || || || ||||| || || ||| | || || || | | Sbjct 18099600 TGCAAATATTTGTCAAGACTTTGACTGGAAAGACTATCACTCTGGAGGTGGAGGGTTCGG 18099659 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||| || | ||||| || | || ||| || ||||| || ||||| || |||| Sbjct 18099660 TTACCATAGACAATGTCAAGGCAAGGATTCAAGACAAGGAAGGGATCCCACCTGACCAAC 18099719 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || ||||||||||| || || | || ||| || || || |||||||||| | Sbjct 18099720 AAAGGCTTATTTTTGCAGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCAGATTATAACA 18099779 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | || || ||||| ||| | ||| | || | ||||| | || || | ||||||| Sbjct 18099780 TTCAGAAGGAATCTACTTTGCATCTTGTTCTTCGATTGCGGGGTGGGATGCAAATATT 18099837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786086171718880