Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20mume_20[refseq_20GCF_5F000346735.1_202014-02-28] 8,164 sequences; 234,030,239 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 6e-12 >seq4 Length=23934096 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/221 (69%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 46761 CCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACG 46820 || ||||| ||| ||||||||||||||| | |||||||| || | | || Sbjct 23380888 CCCTGCGTCACCAAGAAGGCCCAGTGGGCCCTACGCTGGATCGACGGCT---CAGAATCG 23380832 Query 46821 CTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTT 46880 | || ||||| || ||||| || || || ||||| | || || ||||| |||||| Sbjct 23380831 TTTGCGGAGCGGATCGTGGCCTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGGAGTTTT 23380772 Query 46881 GCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAG 46940 ||| || |||| | || | || |||||||||| ||||||||| |||||| Sbjct 23380771 TGCGCGATATTTTGGCTAAAGAAGCGCGGGTTAATGCCGGGACTGACGTTCTCAAACGAG 23380712 Query 46941 TTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTG 46981 ||||||||| | || || || | ||| ||||| ||||| Sbjct 23380711 TTGATCTCGAGAGATGAGGGTTTGCACTGCGACTTCGCGTG 23380671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476562561827040